Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.48□□□□□ -1.85
XRCC1P18887 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
XRCC1P18887 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.48□□□□□ -1.85
XRCC1P18887 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
XRCC1P18887 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.47□□□□□ -1.85
XRCC1P18887 AL021368.2-201ENST00000606125 5352 ntBASIC3.47□□□□□ -1.85
XRCC1P18887 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
XRCC1P18887 PWAR6-201ENST00000552334 4618 ntBASIC3.47□□□□□ -1.85
XRCC1P18887 AF127577.6-201ENST00000623352 2191 ntBASIC3.47□□□□□ -1.85
XRCC1P18887 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
XRCC1P18887 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
XRCC1P18887 SNORA63.1-201ENST00000362493 131 ntBASIC3.47□□□□□ -1.85
XRCC1P18887 OR1L1-202ENST00000373686 1083 ntBASIC3.47□□□□□ -1.85
XRCC1P18887 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
XRCC1P18887 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
XRCC1P18887 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
XRCC1P18887 MIR1250-201ENST00000408098 113 ntBASIC3.47□□□□□ -1.85
XRCC1P18887 AC092638.1-201ENST00000411966 1275 ntBASIC3.47□□□□□ -1.85
XRCC1P18887 RPS7P13-201ENST00000413955 498 ntBASIC3.47□□□□□ -1.85
XRCC1P18887 CRYBB2P1-203ENST00000415709 538 ntBASIC3.47□□□□□ -1.85
XRCC1P18887 AC007390.1-201ENST00000415722 356 ntBASIC3.47□□□□□ -1.85
XRCC1P18887 AC245052.5-201ENST00000416320 649 ntBASIC3.47□□□□□ -1.85
XRCC1P18887 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.47□□□□□ -1.85
XRCC1P18887 PTP4A1P7-201ENST00000423476 514 ntBASIC3.47□□□□□ -1.85
XRCC1P18887 RPL36P19-201ENST00000430744 301 ntBASIC3.47□□□□□ -1.85
XRCC1P18887 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.47□□□□□ -1.85
XRCC1P18887 B3GNT2P1-201ENST00000434960 952 ntBASIC3.47□□□□□ -1.85
XRCC1P18887 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC3.47□□□□□ -1.85
XRCC1P18887 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.47□□□□□ -1.85
XRCC1P18887 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
XRCC1P18887 Z99714.1-201ENST00000450463 807 ntBASIC3.47□□□□□ -1.85
XRCC1P18887 HMGB3P30-201ENST00000457863 606 ntBASIC3.47□□□□□ -1.85
XRCC1P18887 AC091153.1-201ENST00000466297 402 ntBASIC3.47□□□□□ -1.85
XRCC1P18887 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.47□□□□□ -1.85
XRCC1P18887 AC020893.1-201ENST00000502452 580 ntBASIC3.47□□□□□ -1.85
XRCC1P18887 TMEM248P1-201ENST00000510579 951 ntBASIC3.47□□□□□ -1.85
XRCC1P18887 AC104057.1-201ENST00000515547 497 ntBASIC3.47□□□□□ -1.85
XRCC1P18887 SNORA70.18-201ENST00000516696 98 ntBASIC3.47□□□□□ -1.85
XRCC1P18887 AC104115.2-201ENST00000523026 687 ntBASIC3.47□□□□□ -1.85
XRCC1P18887 AP001636.2-201ENST00000525517 696 ntBASIC3.47□□□□□ -1.85
XRCC1P18887 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.47□□□□□ -1.85
XRCC1P18887 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.47□□□□□ -1.85
XRCC1P18887 AC074051.3-201ENST00000570238 358 ntBASIC3.47□□□□□ -1.85
XRCC1P18887 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.47□□□□□ -1.85
XRCC1P18887 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.47□□□□□ -1.85
XRCC1P18887 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.47□□□□□ -1.85
XRCC1P18887 BNIP3P38-201ENST00000601117 544 ntBASIC3.47□□□□□ -1.85
XRCC1P18887 AL020997.3-201ENST00000602843 359 ntBASIC3.47□□□□□ -1.85
XRCC1P18887 RPAP2P1-201ENST00000603626 1168 ntBASIC3.47□□□□□ -1.85
XRCC1P18887 AC084757.4-201ENST00000616350 526 ntBASIC3.47□□□□□ -1.85
XRCC1P18887 AC012314.7-201ENST00000619693 93 ntBASIC3.47□□□□□ -1.85
XRCC1P18887 MIR7153-201ENST00000637758 57 ntBASIC3.47□□□□□ -1.85
XRCC1P18887 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
XRCC1P18887 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
XRCC1P18887 AC068647.1-201ENST00000489539 2265 ntBASIC3.47□□□□□ -1.85
XRCC1P18887 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
XRCC1P18887 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.47□□□□□ -1.85
XRCC1P18887 DBF4P1-201ENST00000412976 1892 ntBASIC3.47□□□□□ -1.85
XRCC1P18887 MTND5P31-201ENST00000419366 1374 ntBASIC3.47□□□□□ -1.85
XRCC1P18887 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
XRCC1P18887 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
XRCC1P18887 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
XRCC1P18887 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
XRCC1P18887 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
XRCC1P18887 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.46□□□□□ -1.86
XRCC1P18887 SSXP10-201ENST00000402595 565 ntBASIC3.46□□□□□ -1.86
XRCC1P18887 AL121978.1-201ENST00000402778 359 ntBASIC3.46□□□□□ -1.86
XRCC1P18887 SFR1P1-201ENST00000403720 688 ntBASIC3.46□□□□□ -1.86
XRCC1P18887 RPL7P27-201ENST00000403775 720 ntBASIC3.46□□□□□ -1.86
XRCC1P18887 AC073264.1-201ENST00000411508 416 ntBASIC3.46□□□□□ -1.86
XRCC1P18887 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.46□□□□□ -1.86
XRCC1P18887 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.46□□□□□ -1.86
XRCC1P18887 AL049610.1-201ENST00000423374 372 ntBASIC3.46□□□□□ -1.86
XRCC1P18887 AC096632.1-201ENST00000427395 310 ntBASIC3.46□□□□□ -1.86
XRCC1P18887 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.46□□□□□ -1.86
XRCC1P18887 AL159987.2-201ENST00000432754 307 ntBASIC3.46□□□□□ -1.86
XRCC1P18887 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.46□□□□□ -1.86
XRCC1P18887 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.46□□□□□ -1.86
XRCC1P18887 CYCSP43-201ENST00000438233 310 ntBASIC3.46□□□□□ -1.86
XRCC1P18887 AL590399.6-201ENST00000446396 307 ntBASIC3.46□□□□□ -1.86
XRCC1P18887 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.46□□□□□ -1.86
XRCC1P18887 CYCSP35-201ENST00000451978 304 ntBASIC3.46□□□□□ -1.86
XRCC1P18887 AC087312.1-201ENST00000471411 480 ntBASIC3.46□□□□□ -1.86
XRCC1P18887 AC023598.1-201ENST00000472521 361 ntBASIC3.46□□□□□ -1.86
XRCC1P18887 RN7SL442P-201ENST00000473804 320 ntBASIC3.46□□□□□ -1.86
XRCC1P18887 RPS4XP22-201ENST00000480755 780 ntBASIC3.46□□□□□ -1.86
XRCC1P18887 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.46□□□□□ -1.86
XRCC1P18887 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.46□□□□□ -1.86
XRCC1P18887 HIGD1AP10-201ENST00000527837 282 ntBASIC3.46□□□□□ -1.86
XRCC1P18887 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.46□□□□□ -1.86
XRCC1P18887 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.46□□□□□ -1.86
XRCC1P18887 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
XRCC1P18887 ZNF192P1-203ENST00000565888 810 ntBASIC3.46□□□□□ -1.86
XRCC1P18887 AC023825.1-201ENST00000566704 1030 ntBASIC3.46□□□□□ -1.86
XRCC1P18887 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.46□□□□□ -1.86
XRCC1P18887 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.46□□□□□ -1.86
XRCC1P18887 MIR4666A-201ENST00000580160 79 ntBASIC3.46□□□□□ -1.86
XRCC1P18887 AC008507.1-201ENST00000587506 734 ntBASIC3.46□□□□□ -1.86
XRCC1P18887 AP001542.2-201ENST00000593141 364 ntBASIC3.46□□□□□ -1.86
XRCC1P18887 AC006254.3-201ENST00000603353 884 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms