Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 COX6CP17-201ENST00000421389 185 ntBASIC3.74□□□□□ -1.81
CLPTM1O96005 TMSB4XP1-201ENST00000424567 135 ntBASIC3.74□□□□□ -1.81
CLPTM1O96005 AC234781.2-201ENST00000426370 994 ntBASIC3.74□□□□□ -1.81
CLPTM1O96005 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.74□□□□□ -1.81
CLPTM1O96005 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.74□□□□□ -1.81
CLPTM1O96005 UBE2V1P1-201ENST00000430836 445 ntBASIC3.74□□□□□ -1.81
CLPTM1O96005 AL050321.1-201ENST00000432363 400 ntBASIC3.74□□□□□ -1.81
CLPTM1O96005 AC010881.1-201ENST00000433830 235 ntBASIC3.74□□□□□ -1.81
CLPTM1O96005 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.74□□□□□ -1.81
CLPTM1O96005 MTND4P32-201ENST00000437189 1237 ntBASIC3.74□□□□□ -1.81
CLPTM1O96005 CYCSP43-201ENST00000438233 310 ntBASIC3.74□□□□□ -1.81
CLPTM1O96005 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.74□□□□□ -1.81
CLPTM1O96005 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.74□□□□□ -1.81
CLPTM1O96005 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.74□□□□□ -1.81
CLPTM1O96005 AL034418.1-201ENST00000448675 860 ntBASIC3.74□□□□□ -1.81
CLPTM1O96005 NDUFA5P7-201ENST00000452914 242 ntBASIC3.74□□□□□ -1.81
CLPTM1O96005 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.74□□□□□ -1.81
CLPTM1O96005 AC010468.1-201ENST00000461022 817 ntBASIC3.74□□□□□ -1.81
CLPTM1O96005 RN7SL271P-201ENST00000487601 295 ntBASIC3.74□□□□□ -1.81
CLPTM1O96005 RPL30P11-201ENST00000495304 339 ntBASIC3.74□□□□□ -1.81
CLPTM1O96005 RPF2P2-201ENST00000504693 896 ntBASIC3.74□□□□□ -1.81
CLPTM1O96005 AC005921.1-201ENST00000510589 286 ntBASIC3.74□□□□□ -1.81
CLPTM1O96005 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CLPTM1O96005 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.74□□□□□ -1.81
CLPTM1O96005 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.74□□□□□ -1.81
CLPTM1O96005 AP001189.2-201ENST00000527320 189 ntBASIC3.74□□□□□ -1.81
CLPTM1O96005 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CLPTM1O96005 TRAV8-5-201ENST00000537369 341 ntBASIC3.74□□□□□ -1.81
CLPTM1O96005 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.74□□□□□ -1.81
CLPTM1O96005 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.74□□□□□ -1.81
CLPTM1O96005 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.74□□□□□ -1.81
CLPTM1O96005 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.74□□□□□ -1.81
CLPTM1O96005 OR4K7P-201ENST00000580232 945 ntBASIC3.74□□□□□ -1.81
CLPTM1O96005 AC110760.3-201ENST00000598794 467 ntBASIC3.74□□□□□ -1.81
CLPTM1O96005 VN1R82P-201ENST00000601481 356 ntBASIC3.74□□□□□ -1.81
CLPTM1O96005 AL022161.1-201ENST00000604390 213 ntBASIC3.74□□□□□ -1.81
CLPTM1O96005 AC121247.2-201ENST00000604776 136 ntBASIC3.74□□□□□ -1.81
CLPTM1O96005 AL354984.3-201ENST00000604803 325 ntBASIC3.74□□□□□ -1.81
CLPTM1O96005 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.74□□□□□ -1.81
CLPTM1O96005 AC245008.1-201ENST00000608123 476 ntBASIC3.74□□□□□ -1.81
CLPTM1O96005 RMST_8.1-201ENST00000610287 165 ntBASIC3.74□□□□□ -1.81
CLPTM1O96005 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
CLPTM1O96005 MIR6810-201ENST00000622701 70 ntBASIC3.74□□□□□ -1.81
CLPTM1O96005 AC008013.2-202ENST00000637965 364 ntBASIC3.74□□□□□ -1.81
CLPTM1O96005 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
CLPTM1O96005 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
CLPTM1O96005 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
CLPTM1O96005 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CLPTM1O96005 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
CLPTM1O96005 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.74□□□□□ -1.81
CLPTM1O96005 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CLPTM1O96005 AC005539.1-201ENST00000443768 1479 ntBASIC3.73□□□□□ -1.81
CLPTM1O96005 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLPTM1O96005 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CLPTM1O96005 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLPTM1O96005 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.73□□□□□ -1.81
CLPTM1O96005 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLPTM1O96005 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.73□□□□□ -1.81
CLPTM1O96005 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CLPTM1O96005 SNORA62-201ENST00000365493 153 ntBASIC3.73□□□□□ -1.81
CLPTM1O96005 SNORA11F-201ENST00000408237 128 ntBASIC3.73□□□□□ -1.81
CLPTM1O96005 AC068533.2-201ENST00000411872 306 ntBASIC3.73□□□□□ -1.81
CLPTM1O96005 AC004022.2-201ENST00000413824 193 ntBASIC3.73□□□□□ -1.81
CLPTM1O96005 LUZP4P1-201ENST00000415420 344 ntBASIC3.73□□□□□ -1.81
CLPTM1O96005 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.73□□□□□ -1.81
CLPTM1O96005 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.73□□□□□ -1.81
CLPTM1O96005 AC092634.6-201ENST00000418558 192 ntBASIC3.73□□□□□ -1.81
CLPTM1O96005 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.73□□□□□ -1.81
CLPTM1O96005 AC009237.2-201ENST00000421358 284 ntBASIC3.73□□□□□ -1.81
CLPTM1O96005 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.73□□□□□ -1.81
CLPTM1O96005 AL365203.2-201ENST00000423444 196 ntBASIC3.73□□□□□ -1.81
CLPTM1O96005 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CLPTM1O96005 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.73□□□□□ -1.81
CLPTM1O96005 AC005345.1-201ENST00000431868 217 ntBASIC3.73□□□□□ -1.81
CLPTM1O96005 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.73□□□□□ -1.81
CLPTM1O96005 RPL37P1-201ENST00000432310 284 ntBASIC3.73□□□□□ -1.81
CLPTM1O96005 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.73□□□□□ -1.81
CLPTM1O96005 AL591503.2-201ENST00000442314 1005 ntBASIC3.73□□□□□ -1.81
CLPTM1O96005 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.73□□□□□ -1.81
CLPTM1O96005 RPS29P31-201ENST00000446147 164 ntBASIC3.73□□□□□ -1.81
CLPTM1O96005 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.73□□□□□ -1.81
CLPTM1O96005 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CLPTM1O96005 RPL23AP81-201ENST00000455252 467 ntBASIC3.73□□□□□ -1.81
CLPTM1O96005 RN7SL303P-201ENST00000469773 251 ntBASIC3.73□□□□□ -1.81
CLPTM1O96005 LINC00888-204ENST00000487386 421 ntBASIC3.73□□□□□ -1.81
CLPTM1O96005 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.73□□□□□ -1.81
CLPTM1O96005 FTH1P24-201ENST00000503502 462 ntBASIC3.73□□□□□ -1.81
CLPTM1O96005 HSPE1P23-201ENST00000509838 286 ntBASIC3.73□□□□□ -1.81
CLPTM1O96005 RNU6-232P-201ENST00000517144 64 ntBASIC3.73□□□□□ -1.81
CLPTM1O96005 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.73□□□□□ -1.81
CLPTM1O96005 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.73□□□□□ -1.81
CLPTM1O96005 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CLPTM1O96005 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.73□□□□□ -1.81
CLPTM1O96005 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.73□□□□□ -1.81
CLPTM1O96005 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.73□□□□□ -1.81
CLPTM1O96005 AC135628.1-201ENST00000568867 534 ntBASIC3.73□□□□□ -1.81
CLPTM1O96005 AC002400.1-201ENST00000569310 726 ntBASIC3.73□□□□□ -1.81
CLPTM1O96005 AC023575.1-201ENST00000580510 358 ntBASIC3.73□□□□□ -1.81
CLPTM1O96005 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.73□□□□□ -1.81
CLPTM1O96005 KPNA2P3-201ENST00000584190 848 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms