Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 AC098976.1-201ENST00000513014 541 ntBASIC5.22□□□□□ -1.57
RFXAPO00287 RNU6-150P-201ENST00000516237 95 ntBASIC5.22□□□□□ -1.57
RFXAPO00287 RNA5SP135-201ENST00000517019 125 ntBASIC5.22□□□□□ -1.57
RFXAPO00287 BTF3P12-201ENST00000519620 469 ntBASIC5.22□□□□□ -1.57
RFXAPO00287 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC5.22□□□□□ -1.57
RFXAPO00287 PSMA2P1-201ENST00000526365 646 ntBASIC5.22□□□□□ -1.57
RFXAPO00287 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC5.22□□□□□ -1.57
RFXAPO00287 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.22□□□□□ -1.57
RFXAPO00287 AC055876.1-202ENST00000567053 138 ntBASIC5.22□□□□□ -1.57
RFXAPO00287 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.22□□□□□ -1.57
RFXAPO00287 AC005191.1-201ENST00000603950 358 ntBASIC5.22□□□□□ -1.57
RFXAPO00287 AC112187.2-201ENST00000604345 283 ntBASIC5.22□□□□□ -1.57
RFXAPO00287 ARF4P1-201ENST00000605447 541 ntBASIC5.22□□□□□ -1.57
RFXAPO00287 AC021646.1-201ENST00000605469 484 ntBASIC5.22□□□□□ -1.57
RFXAPO00287 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC5.22□□□□□ -1.57
RFXAPO00287 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.22□□□□□ -1.57
RFXAPO00287 ZYXP1-201ENST00000617638 118 ntBASIC5.22□□□□□ -1.57
RFXAPO00287 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.22□□□□□ -1.57
RFXAPO00287 AC138649.5-201ENST00000637456 137 ntBASIC5.22□□□□□ -1.57
RFXAPO00287 AL731566.1-201ENST00000620490 1937 ntBASIC5.22□□□□□ -1.57
RFXAPO00287 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RFXAPO00287 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.22□□□□□ -1.57
RFXAPO00287 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RFXAPO00287 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
RFXAPO00287 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.22□□□□□ -1.57
RFXAPO00287 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
RFXAPO00287 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
RFXAPO00287 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RFXAPO00287 CDY11P-201ENST00000447168 1651 ntBASIC5.21□□□□□ -1.57
RFXAPO00287 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.21□□□□□ -1.57
RFXAPO00287 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.21□□□□□ -1.57
RFXAPO00287 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.57
RFXAPO00287 MAPK10-338ENST00000641647 3362 ntBASIC5.21□□□□□ -1.57
RFXAPO00287 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.21□□□□□ -1.57
RFXAPO00287 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
RFXAPO00287 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.57
RFXAPO00287 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RFXAPO00287 AC092681.1-201ENST00000297369 291 ntBASIC5.21□□□□□ -1.58
RFXAPO00287 Y_RNA.231-201ENST00000364358 102 ntBASIC5.21□□□□□ -1.58
RFXAPO00287 Y_RNA.259-201ENST00000364619 101 ntBASIC5.21□□□□□ -1.58
RFXAPO00287 RN7SKP153-201ENST00000365026 316 ntBASIC5.21□□□□□ -1.58
RFXAPO00287 RNU1-39P-201ENST00000383897 165 ntBASIC5.21□□□□□ -1.58
RFXAPO00287 SNORA32.2-201ENST00000384049 122 ntBASIC5.21□□□□□ -1.58
RFXAPO00287 RNU4-31P-201ENST00000384211 141 ntBASIC5.21□□□□□ -1.58
RFXAPO00287 SNORA5.1-201ENST00000384275 131 ntBASIC5.21□□□□□ -1.58
RFXAPO00287 MIR568-201ENST00000385036 95 ntBASIC5.21□□□□□ -1.58
RFXAPO00287 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
RFXAPO00287 RNU2-62P-201ENST00000410868 191 ntBASIC5.21□□□□□ -1.58
RFXAPO00287 TBCAP2-201ENST00000416175 326 ntBASIC5.21□□□□□ -1.58
RFXAPO00287 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.21□□□□□ -1.58
RFXAPO00287 AL358176.2-201ENST00000425769 204 ntBASIC5.21□□□□□ -1.58
RFXAPO00287 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC5.21□□□□□ -1.58
RFXAPO00287 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.21□□□□□ -1.58
RFXAPO00287 Y_RNA.639-201ENST00000458981 102 ntBASIC5.21□□□□□ -1.58
RFXAPO00287 RPS27AP17-201ENST00000463344 455 ntBASIC5.21□□□□□ -1.58
RFXAPO00287 RPS15AP36-201ENST00000492022 382 ntBASIC5.21□□□□□ -1.58
RFXAPO00287 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RFXAPO00287 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RFXAPO00287 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RFXAPO00287 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC5.21□□□□□ -1.58
RFXAPO00287 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC5.21□□□□□ -1.58
RFXAPO00287 AC007016.1-201ENST00000512110 244 ntBASIC5.21□□□□□ -1.58
RFXAPO00287 AC093677.1-201ENST00000514414 678 ntBASIC5.21□□□□□ -1.58
RFXAPO00287 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RFXAPO00287 RNU6-1334P-201ENST00000516032 105 ntBASIC5.21□□□□□ -1.58
RFXAPO00287 RNU6-264P-201ENST00000517134 104 ntBASIC5.21□□□□□ -1.58
RFXAPO00287 COX6CP5-201ENST00000527162 228 ntBASIC5.21□□□□□ -1.58
RFXAPO00287 OR5BN1P-201ENST00000532955 829 ntBASIC5.21□□□□□ -1.58
RFXAPO00287 AP001804.2-201ENST00000533932 910 ntBASIC5.21□□□□□ -1.58
RFXAPO00287 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.21□□□□□ -1.58
RFXAPO00287 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.21□□□□□ -1.58
RFXAPO00287 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.21□□□□□ -1.58
RFXAPO00287 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC5.21□□□□□ -1.58
RFXAPO00287 MIR4503-201ENST00000582187 83 ntBASIC5.21□□□□□ -1.58
RFXAPO00287 AC016925.2-201ENST00000605108 242 ntBASIC5.21□□□□□ -1.58
RFXAPO00287 MIR98-201ENST00000606724 119 ntBASIC5.21□□□□□ -1.58
RFXAPO00287 AL627309.6-201ENST00000606857 840 ntBASIC5.21□□□□□ -1.58
RFXAPO00287 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC5.21□□□□□ -1.58
RFXAPO00287 AP006248.2-201ENST00000623309 592 ntBASIC5.21□□□□□ -1.58
RFXAPO00287 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC5.21□□□□□ -1.58
RFXAPO00287 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RFXAPO00287 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.21□□□□□ -1.58
RFXAPO00287 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.21□□□□□ -1.58
RFXAPO00287 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
RFXAPO00287 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RFXAPO00287 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.21□□□□□ -1.58
RFXAPO00287 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
RFXAPO00287 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RFXAPO00287 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RFXAPO00287 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
RFXAPO00287 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RFXAPO00287 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.21□□□□□ -1.58
RFXAPO00287 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RFXAPO00287 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.2□□□□□ -1.58
RFXAPO00287 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
RFXAPO00287 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
RFXAPO00287 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RFXAPO00287 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.2□□□□□ -1.58
RFXAPO00287 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RFXAPO00287 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms