Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Gm9013-201ENSMUST00000132939 882 ntBASIC16.62■□□□□ 0.25
Cldn3Q9Z0G9 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Cldn3Q9Z0G9 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
Cldn3Q9Z0G9 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
Cldn3Q9Z0G9 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cldn3Q9Z0G9 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Cldn3Q9Z0G9 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cldn3Q9Z0G9 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cldn3Q9Z0G9 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Cldn3Q9Z0G9 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cldn3Q9Z0G9 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.25
Cldn3Q9Z0G9 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cldn3Q9Z0G9 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cldn3Q9Z0G9 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cldn3Q9Z0G9 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Cldn3Q9Z0G9 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.61■□□□□ 0.25
Cldn3Q9Z0G9 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.61■□□□□ 0.25
Cldn3Q9Z0G9 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cldn3Q9Z0G9 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cldn3Q9Z0G9 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.61■□□□□ 0.25
Cldn3Q9Z0G9 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cldn3Q9Z0G9 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.61■□□□□ 0.25
Cldn3Q9Z0G9 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cldn3Q9Z0G9 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.61■□□□□ 0.25
Cldn3Q9Z0G9 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cldn3Q9Z0G9 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cldn3Q9Z0G9 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cldn3Q9Z0G9 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cldn3Q9Z0G9 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Cldn3Q9Z0G9 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cldn3Q9Z0G9 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cldn3Q9Z0G9 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cldn3Q9Z0G9 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cldn3Q9Z0G9 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Cldn3Q9Z0G9 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cldn3Q9Z0G9 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cldn3Q9Z0G9 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Cldn3Q9Z0G9 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cldn3Q9Z0G9 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Cldn3Q9Z0G9 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cldn3Q9Z0G9 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cldn3Q9Z0G9 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cldn3Q9Z0G9 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Cldn3Q9Z0G9 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cldn3Q9Z0G9 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cldn3Q9Z0G9 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cldn3Q9Z0G9 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cldn3Q9Z0G9 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cldn3Q9Z0G9 Gm6659-201ENSMUST00000174752 547 ntBASIC16.6■□□□□ 0.25
Cldn3Q9Z0G9 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cldn3Q9Z0G9 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Cldn3Q9Z0G9 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.6■□□□□ 0.25
Cldn3Q9Z0G9 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cldn3Q9Z0G9 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cldn3Q9Z0G9 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cldn3Q9Z0G9 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cldn3Q9Z0G9 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cldn3Q9Z0G9 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cldn3Q9Z0G9 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cldn3Q9Z0G9 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cldn3Q9Z0G9 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.6■□□□□ 0.25
Cldn3Q9Z0G9 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cldn3Q9Z0G9 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cldn3Q9Z0G9 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cldn3Q9Z0G9 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Cldn3Q9Z0G9 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cldn3Q9Z0G9 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cldn3Q9Z0G9 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
Cldn3Q9Z0G9 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Cldn3Q9Z0G9 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Cldn3Q9Z0G9 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Cldn3Q9Z0G9 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.59■□□□□ 0.25
Cldn3Q9Z0G9 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cldn3Q9Z0G9 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cldn3Q9Z0G9 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cldn3Q9Z0G9 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cldn3Q9Z0G9 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Cldn3Q9Z0G9 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Cldn3Q9Z0G9 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cldn3Q9Z0G9 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.59■□□□□ 0.25
Cldn3Q9Z0G9 Gm25016-201ENSMUST00000158399 131 ntBASIC16.59■□□□□ 0.25
Cldn3Q9Z0G9 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Cldn3Q9Z0G9 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cldn3Q9Z0G9 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.59■□□□□ 0.25
Cldn3Q9Z0G9 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.59■□□□□ 0.25
Cldn3Q9Z0G9 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cldn3Q9Z0G9 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.59■□□□□ 0.25
Cldn3Q9Z0G9 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cldn3Q9Z0G9 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cldn3Q9Z0G9 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cldn3Q9Z0G9 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cldn3Q9Z0G9 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cldn3Q9Z0G9 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cldn3Q9Z0G9 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cldn3Q9Z0G9 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.59■□□□□ 0.25
Cldn3Q9Z0G9 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cldn3Q9Z0G9 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cldn3Q9Z0G9 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Cldn3Q9Z0G9 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cldn3Q9Z0G9 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms