Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col13a1Q9R1N9 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col13a1Q9R1N9 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col13a1Q9R1N9 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col13a1Q9R1N9 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.94□□□□□ -0.18
Col13a1Q9R1N9 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col13a1Q9R1N9 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col13a1Q9R1N9 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col13a1Q9R1N9 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC13.93□□□□□ -0.18
Col13a1Q9R1N9 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col13a1Q9R1N9 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col13a1Q9R1N9 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.93□□□□□ -0.18
Col13a1Q9R1N9 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col13a1Q9R1N9 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Col13a1Q9R1N9 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC13.93□□□□□ -0.18
Col13a1Q9R1N9 Gm44357-201ENSMUST00000195897 142 ntBASIC13.93□□□□□ -0.18
Col13a1Q9R1N9 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.93□□□□□ -0.18
Col13a1Q9R1N9 Gm19658-201ENSMUST00000196231 138 ntBASIC13.93□□□□□ -0.18
Col13a1Q9R1N9 Gm44367-201ENSMUST00000196836 138 ntBASIC13.93□□□□□ -0.18
Col13a1Q9R1N9 Gm44350-201ENSMUST00000197197 138 ntBASIC13.93□□□□□ -0.18
Col13a1Q9R1N9 Gm44390-201ENSMUST00000197533 144 ntBASIC13.93□□□□□ -0.18
Col13a1Q9R1N9 Gm44313-201ENSMUST00000198018 138 ntBASIC13.93□□□□□ -0.18
Col13a1Q9R1N9 Gm44486-201ENSMUST00000198508 138 ntBASIC13.93□□□□□ -0.18
Col13a1Q9R1N9 Gm44454-201ENSMUST00000198541 138 ntBASIC13.93□□□□□ -0.18
Col13a1Q9R1N9 Gm44314-201ENSMUST00000199263 138 ntBASIC13.93□□□□□ -0.18
Col13a1Q9R1N9 Gm44394-201ENSMUST00000199558 138 ntBASIC13.93□□□□□ -0.18
Col13a1Q9R1N9 Gm44484-201ENSMUST00000199873 138 ntBASIC13.93□□□□□ -0.18
Col13a1Q9R1N9 Gm44466-201ENSMUST00000200264 138 ntBASIC13.93□□□□□ -0.18
Col13a1Q9R1N9 Gm44359-201ENSMUST00000200671 138 ntBASIC13.93□□□□□ -0.18
Col13a1Q9R1N9 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col13a1Q9R1N9 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC13.93□□□□□ -0.18
Col13a1Q9R1N9 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col13a1Q9R1N9 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col13a1Q9R1N9 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col13a1Q9R1N9 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col13a1Q9R1N9 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col13a1Q9R1N9 Gm43294-201ENSMUST00000202850 2490 ntBASIC13.93□□□□□ -0.18
Col13a1Q9R1N9 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col13a1Q9R1N9 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col13a1Q9R1N9 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col13a1Q9R1N9 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col13a1Q9R1N9 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col13a1Q9R1N9 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col13a1Q9R1N9 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Col13a1Q9R1N9 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.93□□□□□ -0.18
Col13a1Q9R1N9 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC13.93□□□□□ -0.18
Col13a1Q9R1N9 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col13a1Q9R1N9 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col13a1Q9R1N9 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13.92□□□□□ -0.18
Col13a1Q9R1N9 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col13a1Q9R1N9 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col13a1Q9R1N9 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col13a1Q9R1N9 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col13a1Q9R1N9 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col13a1Q9R1N9 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col13a1Q9R1N9 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col13a1Q9R1N9 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col13a1Q9R1N9 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC13.92□□□□□ -0.18
Col13a1Q9R1N9 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC13.92□□□□□ -0.18
Col13a1Q9R1N9 Gm27867-201ENSMUST00000184778 125 ntBASIC13.92□□□□□ -0.18
Col13a1Q9R1N9 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.92□□□□□ -0.18
Col13a1Q9R1N9 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.92□□□□□ -0.18
Col13a1Q9R1N9 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col13a1Q9R1N9 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col13a1Q9R1N9 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col13a1Q9R1N9 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col13a1Q9R1N9 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col13a1Q9R1N9 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col13a1Q9R1N9 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col13a1Q9R1N9 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Col13a1Q9R1N9 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col13a1Q9R1N9 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col13a1Q9R1N9 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col13a1Q9R1N9 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col13a1Q9R1N9 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col13a1Q9R1N9 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col13a1Q9R1N9 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col13a1Q9R1N9 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col13a1Q9R1N9 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC13.91□□□□□ -0.18
Col13a1Q9R1N9 Gm32996-201ENSMUST00000199828 1447 ntBASIC13.91□□□□□ -0.18
Col13a1Q9R1N9 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col13a1Q9R1N9 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col13a1Q9R1N9 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col13a1Q9R1N9 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col13a1Q9R1N9 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Col13a1Q9R1N9 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col13a1Q9R1N9 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col13a1Q9R1N9 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col13a1Q9R1N9 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Col13a1Q9R1N9 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.91□□□□□ -0.18
Col13a1Q9R1N9 Gm12260-201ENSMUST00000122447 411 ntBASIC13.91□□□□□ -0.18
Col13a1Q9R1N9 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC13.91□□□□□ -0.18
Col13a1Q9R1N9 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.91□□□□□ -0.18
Col13a1Q9R1N9 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col13a1Q9R1N9 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col13a1Q9R1N9 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col13a1Q9R1N9 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col13a1Q9R1N9 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col13a1Q9R1N9 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col13a1Q9R1N9 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms