Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.89■□□□□ 0.29
Scn5aQ9JJV9 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn5aQ9JJV9 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Scn5aQ9JJV9 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn5aQ9JJV9 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
Scn5aQ9JJV9 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.88■□□□□ 0.29
Scn5aQ9JJV9 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.88■□□□□ 0.29
Scn5aQ9JJV9 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn5aQ9JJV9 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.88■□□□□ 0.29
Scn5aQ9JJV9 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Scn5aQ9JJV9 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Scn5aQ9JJV9 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn5aQ9JJV9 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.88■□□□□ 0.29
Scn5aQ9JJV9 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn5aQ9JJV9 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Scn5aQ9JJV9 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn5aQ9JJV9 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn5aQ9JJV9 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn5aQ9JJV9 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Scn5aQ9JJV9 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Scn5aQ9JJV9 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Scn5aQ9JJV9 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.87■□□□□ 0.29
Scn5aQ9JJV9 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Scn5aQ9JJV9 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC16.87■□□□□ 0.29
Scn5aQ9JJV9 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Scn5aQ9JJV9 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn5aQ9JJV9 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn5aQ9JJV9 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn5aQ9JJV9 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Scn5aQ9JJV9 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Scn5aQ9JJV9 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.87■□□□□ 0.29
Scn5aQ9JJV9 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn5aQ9JJV9 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.87■□□□□ 0.29
Scn5aQ9JJV9 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn5aQ9JJV9 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Scn5aQ9JJV9 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Scn5aQ9JJV9 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Scn5aQ9JJV9 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.87■□□□□ 0.29
Scn5aQ9JJV9 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn5aQ9JJV9 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Scn5aQ9JJV9 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn5aQ9JJV9 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn5aQ9JJV9 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn5aQ9JJV9 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn5aQ9JJV9 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Scn5aQ9JJV9 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn5aQ9JJV9 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn5aQ9JJV9 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn5aQ9JJV9 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Scn5aQ9JJV9 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn5aQ9JJV9 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn5aQ9JJV9 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn5aQ9JJV9 Gm27397-201ENSMUST00000184997 107 ntBASIC16.86■□□□□ 0.29
Scn5aQ9JJV9 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn5aQ9JJV9 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Scn5aQ9JJV9 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn5aQ9JJV9 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn5aQ9JJV9 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn5aQ9JJV9 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn5aQ9JJV9 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.86■□□□□ 0.29
Scn5aQ9JJV9 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn5aQ9JJV9 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn5aQ9JJV9 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn5aQ9JJV9 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn5aQ9JJV9 Gm7222-201ENSMUST00000117512 906 ntBASIC16.86■□□□□ 0.29
Scn5aQ9JJV9 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC16.86■□□□□ 0.29
Scn5aQ9JJV9 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.86■□□□□ 0.29
Scn5aQ9JJV9 Mir6404-201ENSMUST00000183699 94 ntBASIC16.86■□□□□ 0.29
Scn5aQ9JJV9 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC16.86■□□□□ 0.29
Scn5aQ9JJV9 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.86■□□□□ 0.29
Scn5aQ9JJV9 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn5aQ9JJV9 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn5aQ9JJV9 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn5aQ9JJV9 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn5aQ9JJV9 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn5aQ9JJV9 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn5aQ9JJV9 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Scn5aQ9JJV9 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.85■□□□□ 0.29
Scn5aQ9JJV9 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn5aQ9JJV9 Gm11764-201ENSMUST00000120221 623 ntBASIC16.85■□□□□ 0.29
Scn5aQ9JJV9 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
Scn5aQ9JJV9 Mir3113-201ENSMUST00000175478 76 ntBASIC16.85■□□□□ 0.29
Scn5aQ9JJV9 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC16.85■□□□□ 0.29
Scn5aQ9JJV9 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Scn5aQ9JJV9 Gm7229-201ENSMUST00000214719 1007 ntBASIC16.85■□□□□ 0.29
Scn5aQ9JJV9 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn5aQ9JJV9 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Scn5aQ9JJV9 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Scn5aQ9JJV9 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn5aQ9JJV9 Rarb-207ENSMUST00000225921 2756 ntBASIC16.85■□□□□ 0.29
Scn5aQ9JJV9 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Scn5aQ9JJV9 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Scn5aQ9JJV9 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Scn5aQ9JJV9 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Scn5aQ9JJV9 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn5aQ9JJV9 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn5aQ9JJV9 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.84■□□□□ 0.29
Scn5aQ9JJV9 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Scn5aQ9JJV9 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn5aQ9JJV9 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms