Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cacna1fQ9JIS7 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cacna1fQ9JIS7 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cacna1fQ9JIS7 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cacna1fQ9JIS7 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cacna1fQ9JIS7 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
Cacna1fQ9JIS7 Gm6257-201ENSMUST00000163864 910 ntBASIC18.56■□□□□ 0.56
Cacna1fQ9JIS7 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cacna1fQ9JIS7 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Cacna1fQ9JIS7 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cacna1fQ9JIS7 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cacna1fQ9JIS7 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cacna1fQ9JIS7 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cacna1fQ9JIS7 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cacna1fQ9JIS7 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC18.56■□□□□ 0.56
Cacna1fQ9JIS7 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cacna1fQ9JIS7 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cacna1fQ9JIS7 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.55■□□□□ 0.56
Cacna1fQ9JIS7 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Cacna1fQ9JIS7 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cacna1fQ9JIS7 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Cacna1fQ9JIS7 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Cacna1fQ9JIS7 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cacna1fQ9JIS7 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cacna1fQ9JIS7 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Cacna1fQ9JIS7 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cacna1fQ9JIS7 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cacna1fQ9JIS7 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cacna1fQ9JIS7 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cacna1fQ9JIS7 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.55■□□□□ 0.56
Cacna1fQ9JIS7 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC18.55■□□□□ 0.56
Cacna1fQ9JIS7 Mir8117-201ENSMUST00000184773 107 ntBASIC18.55■□□□□ 0.56
Cacna1fQ9JIS7 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC18.55■□□□□ 0.56
Cacna1fQ9JIS7 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.55■□□□□ 0.56
Cacna1fQ9JIS7 Bloc1s5-203ENSMUST00000224902 612 ntBASIC18.55■□□□□ 0.56
Cacna1fQ9JIS7 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cacna1fQ9JIS7 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cacna1fQ9JIS7 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Cacna1fQ9JIS7 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cacna1fQ9JIS7 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cacna1fQ9JIS7 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cacna1fQ9JIS7 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cacna1fQ9JIS7 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.54■□□□□ 0.56
Cacna1fQ9JIS7 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cacna1fQ9JIS7 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cacna1fQ9JIS7 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cacna1fQ9JIS7 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cacna1fQ9JIS7 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
Cacna1fQ9JIS7 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cacna1fQ9JIS7 AC154572.2-201ENSMUST00000225105 997 ntBASIC18.54■□□□□ 0.56
Cacna1fQ9JIS7 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cacna1fQ9JIS7 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Cacna1fQ9JIS7 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cacna1fQ9JIS7 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Cacna1fQ9JIS7 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cacna1fQ9JIS7 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Cacna1fQ9JIS7 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cacna1fQ9JIS7 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cacna1fQ9JIS7 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Cacna1fQ9JIS7 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Cacna1fQ9JIS7 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Cacna1fQ9JIS7 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cacna1fQ9JIS7 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cacna1fQ9JIS7 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC18.53■□□□□ 0.56
Cacna1fQ9JIS7 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cacna1fQ9JIS7 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cacna1fQ9JIS7 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC18.53■□□□□ 0.56
Cacna1fQ9JIS7 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cacna1fQ9JIS7 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cacna1fQ9JIS7 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Cacna1fQ9JIS7 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cacna1fQ9JIS7 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cacna1fQ9JIS7 Gm4609-201ENSMUST00000106443 1002 ntBASIC18.53■□□□□ 0.56
Cacna1fQ9JIS7 Gm5138-201ENSMUST00000113842 1002 ntBASIC18.53■□□□□ 0.56
Cacna1fQ9JIS7 Gm15191-201ENSMUST00000117933 1000 ntBASIC18.53■□□□□ 0.56
Cacna1fQ9JIS7 Gm12182-201ENSMUST00000118655 1008 ntBASIC18.53■□□□□ 0.56
Cacna1fQ9JIS7 Gm13882-201ENSMUST00000120886 1002 ntBASIC18.53■□□□□ 0.56
Cacna1fQ9JIS7 Gm10284-201ENSMUST00000145057 1005 ntBASIC18.53■□□□□ 0.56
Cacna1fQ9JIS7 Gm10481-201ENSMUST00000179228 1002 ntBASIC18.53■□□□□ 0.56
Cacna1fQ9JIS7 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC18.53■□□□□ 0.56
Cacna1fQ9JIS7 Gm2574-201ENSMUST00000181051 1002 ntBASIC18.53■□□□□ 0.56
Cacna1fQ9JIS7 Gm3200-201ENSMUST00000181493 1002 ntBASIC18.53■□□□□ 0.56
Cacna1fQ9JIS7 Gm8825-201ENSMUST00000182565 998 ntBASIC18.53■□□□□ 0.56
Cacna1fQ9JIS7 Gm4518-201ENSMUST00000182638 718 ntBASIC18.53■□□□□ 0.56
Cacna1fQ9JIS7 Gm8330-201ENSMUST00000182754 1008 ntBASIC18.53■□□□□ 0.56
Cacna1fQ9JIS7 Gm4575-201ENSMUST00000182991 1002 ntBASIC18.53■□□□□ 0.56
Cacna1fQ9JIS7 Gm8709-201ENSMUST00000183230 1012 ntBASIC18.53■□□□□ 0.56
Cacna1fQ9JIS7 AC147366.1-201ENSMUST00000227671 852 ntBASIC18.53■□□□□ 0.56
Cacna1fQ9JIS7 Gm10293-201ENSMUST00000076317 1002 ntBASIC18.53■□□□□ 0.56
Cacna1fQ9JIS7 Gm6316-201ENSMUST00000082064 1020 ntBASIC18.53■□□□□ 0.56
Cacna1fQ9JIS7 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cacna1fQ9JIS7 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cacna1fQ9JIS7 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Cacna1fQ9JIS7 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cacna1fQ9JIS7 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cacna1fQ9JIS7 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cacna1fQ9JIS7 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Cacna1fQ9JIS7 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC18.52■□□□□ 0.56
Cacna1fQ9JIS7 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
Cacna1fQ9JIS7 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms