Protein–RNA interactions for Protein: Q9JI43

Rhox4b, Homeobox protein EHOX, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4bQ9JI43 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rhox4bQ9JI43 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rhox4bQ9JI43 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rhox4bQ9JI43 Gm2399-201ENSMUST00000104944 225 ntBASIC13.3□□□□□ -0.28
Rhox4bQ9JI43 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rhox4bQ9JI43 Gm42778-201ENSMUST00000199644 553 ntBASIC13.3□□□□□ -0.28
Rhox4bQ9JI43 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC13.3□□□□□ -0.28
Rhox4bQ9JI43 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rhox4bQ9JI43 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rhox4bQ9JI43 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rhox4bQ9JI43 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rhox4bQ9JI43 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rhox4bQ9JI43 Gm13509-201ENSMUST00000119733 1308 ntBASIC13.3□□□□□ -0.28
Rhox4bQ9JI43 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rhox4bQ9JI43 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rhox4bQ9JI43 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rhox4bQ9JI43 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rhox4bQ9JI43 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rhox4bQ9JI43 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Rhox4bQ9JI43 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rhox4bQ9JI43 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rhox4bQ9JI43 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rhox4bQ9JI43 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Rhox4bQ9JI43 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rhox4bQ9JI43 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rhox4bQ9JI43 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rhox4bQ9JI43 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Rhox4bQ9JI43 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rhox4bQ9JI43 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Rhox4bQ9JI43 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Rhox4bQ9JI43 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rhox4bQ9JI43 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rhox4bQ9JI43 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rhox4bQ9JI43 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rhox4bQ9JI43 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rhox4bQ9JI43 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rhox4bQ9JI43 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rhox4bQ9JI43 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rhox4bQ9JI43 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rhox4bQ9JI43 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rhox4bQ9JI43 Mir2861-201ENSMUST00000175539 82 ntBASIC13.29□□□□□ -0.28
Rhox4bQ9JI43 Ap3s1-204ENSMUST00000225520 957 ntBASIC13.29□□□□□ -0.28
Rhox4bQ9JI43 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rhox4bQ9JI43 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rhox4bQ9JI43 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC13.29□□□□□ -0.28
Rhox4bQ9JI43 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC13.29□□□□□ -0.28
Rhox4bQ9JI43 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rhox4bQ9JI43 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.29□□□□□ -0.28
Rhox4bQ9JI43 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Rhox4bQ9JI43 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rhox4bQ9JI43 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rhox4bQ9JI43 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rhox4bQ9JI43 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rhox4bQ9JI43 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rhox4bQ9JI43 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rhox4bQ9JI43 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rhox4bQ9JI43 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rhox4bQ9JI43 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rhox4bQ9JI43 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rhox4bQ9JI43 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rhox4bQ9JI43 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rhox4bQ9JI43 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rhox4bQ9JI43 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rhox4bQ9JI43 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rhox4bQ9JI43 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.28□□□□□ -0.28
Rhox4bQ9JI43 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rhox4bQ9JI43 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rhox4bQ9JI43 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rhox4bQ9JI43 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.28□□□□□ -0.28
Rhox4bQ9JI43 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.28□□□□□ -0.28
Rhox4bQ9JI43 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Rhox4bQ9JI43 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Rhox4bQ9JI43 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rhox4bQ9JI43 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rhox4bQ9JI43 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rhox4bQ9JI43 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Rhox4bQ9JI43 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Rhox4bQ9JI43 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rhox4bQ9JI43 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rhox4bQ9JI43 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rhox4bQ9JI43 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rhox4bQ9JI43 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rhox4bQ9JI43 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC13.28□□□□□ -0.28
Rhox4bQ9JI43 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rhox4bQ9JI43 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Rhox4bQ9JI43 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rhox4bQ9JI43 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rhox4bQ9JI43 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rhox4bQ9JI43 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rhox4bQ9JI43 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rhox4bQ9JI43 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rhox4bQ9JI43 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Rhox4bQ9JI43 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rhox4bQ9JI43 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Rhox4bQ9JI43 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rhox4bQ9JI43 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC13.27□□□□□ -0.29
Rhox4bQ9JI43 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rhox4bQ9JI43 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rhox4bQ9JI43 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rhox4bQ9JI43 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms