Protein–RNA interactions for Protein: Q9ES64

Ush1c, Harmonin, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1cQ9ES64 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ush1cQ9ES64 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ush1cQ9ES64 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ush1cQ9ES64 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ush1cQ9ES64 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.86■□□□□ 0.61
Ush1cQ9ES64 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ush1cQ9ES64 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ush1cQ9ES64 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ush1cQ9ES64 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ush1cQ9ES64 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ush1cQ9ES64 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ush1cQ9ES64 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.86■□□□□ 0.61
Ush1cQ9ES64 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ush1cQ9ES64 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.86■□□□□ 0.61
Ush1cQ9ES64 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.86■□□□□ 0.61
Ush1cQ9ES64 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Ush1cQ9ES64 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ush1cQ9ES64 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ush1cQ9ES64 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ush1cQ9ES64 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ush1cQ9ES64 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ush1cQ9ES64 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Ush1cQ9ES64 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ush1cQ9ES64 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC18.85■□□□□ 0.61
Ush1cQ9ES64 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ush1cQ9ES64 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Ush1cQ9ES64 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ush1cQ9ES64 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Ush1cQ9ES64 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ush1cQ9ES64 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ush1cQ9ES64 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ush1cQ9ES64 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ush1cQ9ES64 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Ush1cQ9ES64 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.85■□□□□ 0.61
Ush1cQ9ES64 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Ush1cQ9ES64 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ush1cQ9ES64 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Ush1cQ9ES64 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
Ush1cQ9ES64 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18.85■□□□□ 0.61
Ush1cQ9ES64 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ush1cQ9ES64 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ush1cQ9ES64 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ush1cQ9ES64 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ush1cQ9ES64 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ush1cQ9ES64 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ush1cQ9ES64 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ush1cQ9ES64 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ush1cQ9ES64 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC18.84■□□□□ 0.61
Ush1cQ9ES64 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ush1cQ9ES64 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ush1cQ9ES64 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ush1cQ9ES64 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ush1cQ9ES64 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.84■□□□□ 0.61
Ush1cQ9ES64 Gm26524-201ENSMUST00000192339 390 ntBASIC18.84■□□□□ 0.61
Ush1cQ9ES64 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.84■□□□□ 0.61
Ush1cQ9ES64 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ush1cQ9ES64 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ush1cQ9ES64 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ush1cQ9ES64 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ush1cQ9ES64 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ush1cQ9ES64 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ush1cQ9ES64 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ush1cQ9ES64 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
Ush1cQ9ES64 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Ush1cQ9ES64 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ush1cQ9ES64 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Ush1cQ9ES64 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ush1cQ9ES64 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
Ush1cQ9ES64 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ush1cQ9ES64 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ush1cQ9ES64 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ush1cQ9ES64 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ush1cQ9ES64 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ush1cQ9ES64 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ush1cQ9ES64 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Ush1cQ9ES64 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ush1cQ9ES64 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.83■□□□□ 0.6
Ush1cQ9ES64 Gm10653-202ENSMUST00000139570 835 ntBASIC18.83■□□□□ 0.6
Ush1cQ9ES64 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.83■□□□□ 0.6
Ush1cQ9ES64 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ush1cQ9ES64 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
Ush1cQ9ES64 Asic1-205ENSMUST00000228185 1818 ntBASIC18.83■□□□□ 0.6
Ush1cQ9ES64 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Ush1cQ9ES64 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ush1cQ9ES64 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Ush1cQ9ES64 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Ush1cQ9ES64 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ush1cQ9ES64 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ush1cQ9ES64 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ush1cQ9ES64 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ush1cQ9ES64 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ush1cQ9ES64 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ush1cQ9ES64 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ush1cQ9ES64 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Ush1cQ9ES64 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ush1cQ9ES64 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ush1cQ9ES64 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ush1cQ9ES64 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ush1cQ9ES64 Gm12527-201ENSMUST00000117967 564 ntBASIC18.82■□□□□ 0.6
Ush1cQ9ES64 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms