Protein–RNA interactions for Protein: Q9EQU3

Tlr9, Toll-like receptor 9, mousemouse

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr9Q9EQU3 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tlr9Q9EQU3 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Tlr9Q9EQU3 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.26■□□□□ 0.35
Tlr9Q9EQU3 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Tlr9Q9EQU3 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tlr9Q9EQU3 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Tlr9Q9EQU3 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Tlr9Q9EQU3 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tlr9Q9EQU3 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tlr9Q9EQU3 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tlr9Q9EQU3 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tlr9Q9EQU3 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tlr9Q9EQU3 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Tlr9Q9EQU3 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tlr9Q9EQU3 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tlr9Q9EQU3 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tlr9Q9EQU3 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Tlr9Q9EQU3 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Tlr9Q9EQU3 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tlr9Q9EQU3 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.25■□□□□ 0.35
Tlr9Q9EQU3 Gm7370-201ENSMUST00000219471 767 ntBASIC17.25■□□□□ 0.35
Tlr9Q9EQU3 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tlr9Q9EQU3 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tlr9Q9EQU3 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Tlr9Q9EQU3 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tlr9Q9EQU3 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tlr9Q9EQU3 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tlr9Q9EQU3 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tlr9Q9EQU3 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.24■□□□□ 0.35
Tlr9Q9EQU3 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.24■□□□□ 0.35
Tlr9Q9EQU3 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Tlr9Q9EQU3 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tlr9Q9EQU3 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tlr9Q9EQU3 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tlr9Q9EQU3 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Tlr9Q9EQU3 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
Tlr9Q9EQU3 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.24■□□□□ 0.35
Tlr9Q9EQU3 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tlr9Q9EQU3 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Tlr9Q9EQU3 Gm10013-201ENSMUST00000106074 672 ntBASIC17.24■□□□□ 0.35
Tlr9Q9EQU3 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Tlr9Q9EQU3 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tlr9Q9EQU3 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Tlr9Q9EQU3 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.24■□□□□ 0.35
Tlr9Q9EQU3 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.24■□□□□ 0.35
Tlr9Q9EQU3 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.24■□□□□ 0.35
Tlr9Q9EQU3 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Tlr9Q9EQU3 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tlr9Q9EQU3 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tlr9Q9EQU3 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tlr9Q9EQU3 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Tlr9Q9EQU3 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tlr9Q9EQU3 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tlr9Q9EQU3 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Tlr9Q9EQU3 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Tlr9Q9EQU3 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tlr9Q9EQU3 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tlr9Q9EQU3 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tlr9Q9EQU3 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tlr9Q9EQU3 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tlr9Q9EQU3 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tlr9Q9EQU3 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.23■□□□□ 0.35
Tlr9Q9EQU3 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Tlr9Q9EQU3 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Tlr9Q9EQU3 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tlr9Q9EQU3 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tlr9Q9EQU3 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tlr9Q9EQU3 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tlr9Q9EQU3 Gm22697-201ENSMUST00000175194 63 ntBASIC17.23■□□□□ 0.35
Tlr9Q9EQU3 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.23■□□□□ 0.35
Tlr9Q9EQU3 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Tlr9Q9EQU3 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tlr9Q9EQU3 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.23■□□□□ 0.35
Tlr9Q9EQU3 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tlr9Q9EQU3 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tlr9Q9EQU3 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tlr9Q9EQU3 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tlr9Q9EQU3 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Tlr9Q9EQU3 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tlr9Q9EQU3 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tlr9Q9EQU3 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Tlr9Q9EQU3 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tlr9Q9EQU3 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tlr9Q9EQU3 Gm6345-202ENSMUST00000180900 204 ntBASIC17.22■□□□□ 0.35
Tlr9Q9EQU3 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tlr9Q9EQU3 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tlr9Q9EQU3 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tlr9Q9EQU3 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tlr9Q9EQU3 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Tlr9Q9EQU3 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tlr9Q9EQU3 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tlr9Q9EQU3 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tlr9Q9EQU3 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Tlr9Q9EQU3 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tlr9Q9EQU3 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Tlr9Q9EQU3 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tlr9Q9EQU3 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tlr9Q9EQU3 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tlr9Q9EQU3 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Tlr9Q9EQU3 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms