Protein–RNA interactions for Protein: Q9EQR5

Lime1, Lck-interacting transmembrane adapter 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1Q9EQR5 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.29□□□□□ -0.12
Lime1Q9EQR5 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lime1Q9EQR5 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lime1Q9EQR5 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Lime1Q9EQR5 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Lime1Q9EQR5 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lime1Q9EQR5 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lime1Q9EQR5 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lime1Q9EQR5 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lime1Q9EQR5 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lime1Q9EQR5 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lime1Q9EQR5 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Lime1Q9EQR5 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lime1Q9EQR5 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lime1Q9EQR5 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lime1Q9EQR5 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC14.28□□□□□ -0.12
Lime1Q9EQR5 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Lime1Q9EQR5 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lime1Q9EQR5 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lime1Q9EQR5 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.28□□□□□ -0.12
Lime1Q9EQR5 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.28□□□□□ -0.12
Lime1Q9EQR5 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Lime1Q9EQR5 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Lime1Q9EQR5 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.28□□□□□ -0.12
Lime1Q9EQR5 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.28□□□□□ -0.12
Lime1Q9EQR5 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lime1Q9EQR5 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.28□□□□□ -0.12
Lime1Q9EQR5 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lime1Q9EQR5 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.28□□□□□ -0.12
Lime1Q9EQR5 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lime1Q9EQR5 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lime1Q9EQR5 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lime1Q9EQR5 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Lime1Q9EQR5 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lime1Q9EQR5 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lime1Q9EQR5 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lime1Q9EQR5 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lime1Q9EQR5 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lime1Q9EQR5 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lime1Q9EQR5 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lime1Q9EQR5 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lime1Q9EQR5 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lime1Q9EQR5 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lime1Q9EQR5 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lime1Q9EQR5 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.27□□□□□ -0.12
Lime1Q9EQR5 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Lime1Q9EQR5 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
Lime1Q9EQR5 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lime1Q9EQR5 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.27□□□□□ -0.12
Lime1Q9EQR5 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.27□□□□□ -0.12
Lime1Q9EQR5 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lime1Q9EQR5 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lime1Q9EQR5 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lime1Q9EQR5 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Lime1Q9EQR5 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lime1Q9EQR5 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Lime1Q9EQR5 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC14.27□□□□□ -0.13
Lime1Q9EQR5 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Lime1Q9EQR5 Gm18421-201ENSMUST00000204122 625 ntBASIC14.27□□□□□ -0.13
Lime1Q9EQR5 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.27□□□□□ -0.13
Lime1Q9EQR5 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC14.27□□□□□ -0.13
Lime1Q9EQR5 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lime1Q9EQR5 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Lime1Q9EQR5 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Lime1Q9EQR5 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lime1Q9EQR5 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lime1Q9EQR5 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lime1Q9EQR5 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lime1Q9EQR5 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lime1Q9EQR5 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Lime1Q9EQR5 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Lime1Q9EQR5 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lime1Q9EQR5 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lime1Q9EQR5 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lime1Q9EQR5 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Lime1Q9EQR5 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lime1Q9EQR5 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lime1Q9EQR5 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lime1Q9EQR5 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.26□□□□□ -0.13
Lime1Q9EQR5 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lime1Q9EQR5 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lime1Q9EQR5 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.26□□□□□ -0.13
Lime1Q9EQR5 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lime1Q9EQR5 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.26□□□□□ -0.13
Lime1Q9EQR5 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lime1Q9EQR5 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lime1Q9EQR5 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Lime1Q9EQR5 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.26□□□□□ -0.13
Lime1Q9EQR5 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.26□□□□□ -0.13
Lime1Q9EQR5 Gm27463-201ENSMUST00000183569 57 ntBASIC14.26□□□□□ -0.13
Lime1Q9EQR5 Gm7370-201ENSMUST00000219471 767 ntBASIC14.26□□□□□ -0.13
Lime1Q9EQR5 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lime1Q9EQR5 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lime1Q9EQR5 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC14.26□□□□□ -0.13
Lime1Q9EQR5 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lime1Q9EQR5 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lime1Q9EQR5 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lime1Q9EQR5 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lime1Q9EQR5 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lime1Q9EQR5 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms