Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-4Q9EQM3 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.8■□□□□ 0.28
Nkx2-4Q9EQM3 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-4Q9EQM3 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-4Q9EQM3 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.8■□□□□ 0.28
Nkx2-4Q9EQM3 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC16.8■□□□□ 0.28
Nkx2-4Q9EQM3 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-4Q9EQM3 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.8■□□□□ 0.28
Nkx2-4Q9EQM3 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-4Q9EQM3 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-4Q9EQM3 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-4Q9EQM3 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-4Q9EQM3 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-4Q9EQM3 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-4Q9EQM3 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-4Q9EQM3 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-4Q9EQM3 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-4Q9EQM3 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.79■□□□□ 0.28
Nkx2-4Q9EQM3 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Nkx2-4Q9EQM3 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Nkx2-4Q9EQM3 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.79■□□□□ 0.28
Nkx2-4Q9EQM3 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.79■□□□□ 0.28
Nkx2-4Q9EQM3 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.79■□□□□ 0.28
Nkx2-4Q9EQM3 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-4Q9EQM3 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-4Q9EQM3 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-4Q9EQM3 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-4Q9EQM3 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-4Q9EQM3 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.79■□□□□ 0.28
Nkx2-4Q9EQM3 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-4Q9EQM3 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-4Q9EQM3 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-4Q9EQM3 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-4Q9EQM3 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-4Q9EQM3 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Nkx2-4Q9EQM3 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.78■□□□□ 0.28
Nkx2-4Q9EQM3 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-4Q9EQM3 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-4Q9EQM3 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-4Q9EQM3 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-4Q9EQM3 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-4Q9EQM3 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.78■□□□□ 0.28
Nkx2-4Q9EQM3 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Nkx2-4Q9EQM3 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Nkx2-4Q9EQM3 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.78■□□□□ 0.28
Nkx2-4Q9EQM3 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC16.78■□□□□ 0.28
Nkx2-4Q9EQM3 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-4Q9EQM3 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC16.78■□□□□ 0.28
Nkx2-4Q9EQM3 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-4Q9EQM3 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC16.78■□□□□ 0.28
Nkx2-4Q9EQM3 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Nkx2-4Q9EQM3 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.78■□□□□ 0.28
Nkx2-4Q9EQM3 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-4Q9EQM3 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-4Q9EQM3 Gm8396-201ENSMUST00000057361 823 ntBASIC16.78■□□□□ 0.28
Nkx2-4Q9EQM3 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-4Q9EQM3 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-4Q9EQM3 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-4Q9EQM3 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-4Q9EQM3 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-4Q9EQM3 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.78■□□□□ 0.28
Nkx2-4Q9EQM3 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Nkx2-4Q9EQM3 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Nkx2-4Q9EQM3 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nkx2-4Q9EQM3 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nkx2-4Q9EQM3 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.77■□□□□ 0.28
Nkx2-4Q9EQM3 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nkx2-4Q9EQM3 Gm25406-201ENSMUST00000157599 105 ntBASIC16.77■□□□□ 0.28
Nkx2-4Q9EQM3 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Nkx2-4Q9EQM3 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Nkx2-4Q9EQM3 Gm37171-201ENSMUST00000192636 1185 ntBASIC16.77■□□□□ 0.28
Nkx2-4Q9EQM3 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.77■□□□□ 0.28
Nkx2-4Q9EQM3 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.77■□□□□ 0.28
Nkx2-4Q9EQM3 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.77■□□□□ 0.28
Nkx2-4Q9EQM3 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nkx2-4Q9EQM3 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nkx2-4Q9EQM3 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Nkx2-4Q9EQM3 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nkx2-4Q9EQM3 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nkx2-4Q9EQM3 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nkx2-4Q9EQM3 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Nkx2-4Q9EQM3 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nkx2-4Q9EQM3 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nkx2-4Q9EQM3 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.77■□□□□ 0.27
Nkx2-4Q9EQM3 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Nkx2-4Q9EQM3 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
Nkx2-4Q9EQM3 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nkx2-4Q9EQM3 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nkx2-4Q9EQM3 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx2-4Q9EQM3 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx2-4Q9EQM3 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx2-4Q9EQM3 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.76■□□□□ 0.27
Nkx2-4Q9EQM3 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx2-4Q9EQM3 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx2-4Q9EQM3 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Nkx2-4Q9EQM3 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.76■□□□□ 0.27
Nkx2-4Q9EQM3 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx2-4Q9EQM3 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx2-4Q9EQM3 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.76■□□□□ 0.27
Nkx2-4Q9EQM3 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms