Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ssmem1Q9D9Y8 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ssmem1Q9D9Y8 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ssmem1Q9D9Y8 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ssmem1Q9D9Y8 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ssmem1Q9D9Y8 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ssmem1Q9D9Y8 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ssmem1Q9D9Y8 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ssmem1Q9D9Y8 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ssmem1Q9D9Y8 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ssmem1Q9D9Y8 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.18□□□□□ -0.14
Ssmem1Q9D9Y8 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ssmem1Q9D9Y8 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ssmem1Q9D9Y8 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ssmem1Q9D9Y8 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ssmem1Q9D9Y8 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ssmem1Q9D9Y8 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.17□□□□□ -0.14
Ssmem1Q9D9Y8 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.17□□□□□ -0.14
Ssmem1Q9D9Y8 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.17□□□□□ -0.14
Ssmem1Q9D9Y8 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ssmem1Q9D9Y8 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ssmem1Q9D9Y8 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ssmem1Q9D9Y8 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.17□□□□□ -0.14
Ssmem1Q9D9Y8 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ssmem1Q9D9Y8 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ssmem1Q9D9Y8 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.17□□□□□ -0.14
Ssmem1Q9D9Y8 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ssmem1Q9D9Y8 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ssmem1Q9D9Y8 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ssmem1Q9D9Y8 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ssmem1Q9D9Y8 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ssmem1Q9D9Y8 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ssmem1Q9D9Y8 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ssmem1Q9D9Y8 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssmem1Q9D9Y8 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssmem1Q9D9Y8 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssmem1Q9D9Y8 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssmem1Q9D9Y8 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssmem1Q9D9Y8 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.16□□□□□ -0.14
Ssmem1Q9D9Y8 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssmem1Q9D9Y8 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.16□□□□□ -0.14
Ssmem1Q9D9Y8 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Ssmem1Q9D9Y8 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssmem1Q9D9Y8 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssmem1Q9D9Y8 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.16□□□□□ -0.14
Ssmem1Q9D9Y8 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.16□□□□□ -0.14
Ssmem1Q9D9Y8 Gm10052-201ENSMUST00000168019 960 ntBASIC14.16□□□□□ -0.14
Ssmem1Q9D9Y8 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ssmem1Q9D9Y8 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssmem1Q9D9Y8 Gm7729-201ENSMUST00000050143 801 ntBASIC14.16□□□□□ -0.14
Ssmem1Q9D9Y8 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.16□□□□□ -0.14
Ssmem1Q9D9Y8 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssmem1Q9D9Y8 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.16□□□□□ -0.14
Ssmem1Q9D9Y8 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssmem1Q9D9Y8 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssmem1Q9D9Y8 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssmem1Q9D9Y8 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssmem1Q9D9Y8 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ssmem1Q9D9Y8 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssmem1Q9D9Y8 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssmem1Q9D9Y8 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssmem1Q9D9Y8 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssmem1Q9D9Y8 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssmem1Q9D9Y8 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ssmem1Q9D9Y8 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssmem1Q9D9Y8 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssmem1Q9D9Y8 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ssmem1Q9D9Y8 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssmem1Q9D9Y8 Gm15794-201ENSMUST00000120182 631 ntBASIC14.15□□□□□ -0.14
Ssmem1Q9D9Y8 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssmem1Q9D9Y8 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ssmem1Q9D9Y8 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.15□□□□□ -0.14
Ssmem1Q9D9Y8 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ssmem1Q9D9Y8 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ssmem1Q9D9Y8 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssmem1Q9D9Y8 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssmem1Q9D9Y8 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssmem1Q9D9Y8 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssmem1Q9D9Y8 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Ssmem1Q9D9Y8 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssmem1Q9D9Y8 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssmem1Q9D9Y8 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssmem1Q9D9Y8 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssmem1Q9D9Y8 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssmem1Q9D9Y8 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssmem1Q9D9Y8 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ssmem1Q9D9Y8 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssmem1Q9D9Y8 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssmem1Q9D9Y8 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.15□□□□□ -0.14
Ssmem1Q9D9Y8 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.15□□□□□ -0.14
Ssmem1Q9D9Y8 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssmem1Q9D9Y8 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ssmem1Q9D9Y8 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.15
Ssmem1Q9D9Y8 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.15□□□□□ -0.15
Ssmem1Q9D9Y8 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Ssmem1Q9D9Y8 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ssmem1Q9D9Y8 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssmem1Q9D9Y8 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssmem1Q9D9Y8 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
Ssmem1Q9D9Y8 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms