Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Chmp4bQ9D8B3 Gm11355-201ENSMUST00000121120 306 ntBASIC20.65■□□□□ 0.9
Chmp4bQ9D8B3 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC20.65■□□□□ 0.9
Chmp4bQ9D8B3 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Chmp4bQ9D8B3 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp4bQ9D8B3 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Chmp4bQ9D8B3 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp4bQ9D8B3 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Chmp4bQ9D8B3 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Chmp4bQ9D8B3 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Chmp4bQ9D8B3 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Chmp4bQ9D8B3 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Chmp4bQ9D8B3 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Chmp4bQ9D8B3 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Chmp4bQ9D8B3 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC20.64■□□□□ 0.89
Chmp4bQ9D8B3 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Chmp4bQ9D8B3 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
Chmp4bQ9D8B3 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.64■□□□□ 0.89
Chmp4bQ9D8B3 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC20.64■□□□□ 0.89
Chmp4bQ9D8B3 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Chmp4bQ9D8B3 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.64■□□□□ 0.89
Chmp4bQ9D8B3 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Chmp4bQ9D8B3 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Chmp4bQ9D8B3 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Chmp4bQ9D8B3 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Chmp4bQ9D8B3 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chmp4bQ9D8B3 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chmp4bQ9D8B3 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chmp4bQ9D8B3 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chmp4bQ9D8B3 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chmp4bQ9D8B3 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Chmp4bQ9D8B3 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chmp4bQ9D8B3 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp4bQ9D8B3 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp4bQ9D8B3 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp4bQ9D8B3 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp4bQ9D8B3 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp4bQ9D8B3 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp4bQ9D8B3 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Chmp4bQ9D8B3 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp4bQ9D8B3 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp4bQ9D8B3 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp4bQ9D8B3 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp4bQ9D8B3 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Chmp4bQ9D8B3 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC20.63■□□□□ 0.89
Chmp4bQ9D8B3 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp4bQ9D8B3 Gm18032-201ENSMUST00000222541 538 ntBASIC20.63■□□□□ 0.89
Chmp4bQ9D8B3 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp4bQ9D8B3 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp4bQ9D8B3 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC20.63■□□□□ 0.89
Chmp4bQ9D8B3 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp4bQ9D8B3 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp4bQ9D8B3 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp4bQ9D8B3 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp4bQ9D8B3 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp4bQ9D8B3 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp4bQ9D8B3 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp4bQ9D8B3 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp4bQ9D8B3 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp4bQ9D8B3 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC20.62■□□□□ 0.89
Chmp4bQ9D8B3 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC20.62■□□□□ 0.89
Chmp4bQ9D8B3 Gm36967-201ENSMUST00000193814 266 ntBASIC20.62■□□□□ 0.89
Chmp4bQ9D8B3 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
Chmp4bQ9D8B3 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Chmp4bQ9D8B3 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp4bQ9D8B3 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp4bQ9D8B3 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp4bQ9D8B3 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp4bQ9D8B3 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp4bQ9D8B3 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp4bQ9D8B3 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp4bQ9D8B3 Gm10013-201ENSMUST00000106074 672 ntBASIC20.61■□□□□ 0.89
Chmp4bQ9D8B3 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp4bQ9D8B3 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp4bQ9D8B3 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp4bQ9D8B3 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Chmp4bQ9D8B3 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp4bQ9D8B3 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp4bQ9D8B3 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp4bQ9D8B3 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp4bQ9D8B3 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp4bQ9D8B3 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp4bQ9D8B3 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Chmp4bQ9D8B3 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chmp4bQ9D8B3 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chmp4bQ9D8B3 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chmp4bQ9D8B3 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Chmp4bQ9D8B3 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC20.6■□□□□ 0.89
Chmp4bQ9D8B3 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Chmp4bQ9D8B3 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Chmp4bQ9D8B3 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC20.6■□□□□ 0.89
Chmp4bQ9D8B3 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC20.6■□□□□ 0.89
Chmp4bQ9D8B3 Gm37722-201ENSMUST00000193757 208 ntBASIC20.6■□□□□ 0.89
Chmp4bQ9D8B3 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC20.6■□□□□ 0.89
Chmp4bQ9D8B3 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Chmp4bQ9D8B3 Zkscan3-208ENSMUST00000224820 5398 ntBASIC20.6■□□□□ 0.89
Chmp4bQ9D8B3 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Chmp4bQ9D8B3 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chmp4bQ9D8B3 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chmp4bQ9D8B3 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms