Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tmem54Q9D7S1 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tmem54Q9D7S1 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.37□□□□□ -0.11
Tmem54Q9D7S1 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tmem54Q9D7S1 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tmem54Q9D7S1 Haglr-201ENSMUST00000100000 2085 ntBASIC14.37□□□□□ -0.11
Tmem54Q9D7S1 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Tmem54Q9D7S1 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Tmem54Q9D7S1 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tmem54Q9D7S1 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tmem54Q9D7S1 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tmem54Q9D7S1 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tmem54Q9D7S1 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tmem54Q9D7S1 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Tmem54Q9D7S1 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC14.37□□□□□ -0.11
Tmem54Q9D7S1 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tmem54Q9D7S1 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tmem54Q9D7S1 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tmem54Q9D7S1 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tmem54Q9D7S1 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tmem54Q9D7S1 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Tmem54Q9D7S1 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tmem54Q9D7S1 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tmem54Q9D7S1 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tmem54Q9D7S1 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tmem54Q9D7S1 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tmem54Q9D7S1 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tmem54Q9D7S1 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tmem54Q9D7S1 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tmem54Q9D7S1 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tmem54Q9D7S1 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tmem54Q9D7S1 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Tmem54Q9D7S1 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tmem54Q9D7S1 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tmem54Q9D7S1 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tmem54Q9D7S1 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.36□□□□□ -0.11
Tmem54Q9D7S1 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tmem54Q9D7S1 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.36□□□□□ -0.11
Tmem54Q9D7S1 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tmem54Q9D7S1 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tmem54Q9D7S1 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tmem54Q9D7S1 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tmem54Q9D7S1 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tmem54Q9D7S1 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tmem54Q9D7S1 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tmem54Q9D7S1 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tmem54Q9D7S1 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
Tmem54Q9D7S1 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.36□□□□□ -0.11
Tmem54Q9D7S1 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tmem54Q9D7S1 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tmem54Q9D7S1 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tmem54Q9D7S1 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Tmem54Q9D7S1 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Tmem54Q9D7S1 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.35□□□□□ -0.11
Tmem54Q9D7S1 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tmem54Q9D7S1 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tmem54Q9D7S1 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tmem54Q9D7S1 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tmem54Q9D7S1 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.35□□□□□ -0.11
Tmem54Q9D7S1 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tmem54Q9D7S1 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.35□□□□□ -0.11
Tmem54Q9D7S1 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC14.35□□□□□ -0.11
Tmem54Q9D7S1 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Tmem54Q9D7S1 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.35□□□□□ -0.11
Tmem54Q9D7S1 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tmem54Q9D7S1 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.35□□□□□ -0.11
Tmem54Q9D7S1 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Tmem54Q9D7S1 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tmem54Q9D7S1 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tmem54Q9D7S1 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tmem54Q9D7S1 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tmem54Q9D7S1 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tmem54Q9D7S1 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tmem54Q9D7S1 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tmem54Q9D7S1 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tmem54Q9D7S1 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Tmem54Q9D7S1 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Tmem54Q9D7S1 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Tmem54Q9D7S1 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tmem54Q9D7S1 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Tmem54Q9D7S1 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tmem54Q9D7S1 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tmem54Q9D7S1 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tmem54Q9D7S1 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tmem54Q9D7S1 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tmem54Q9D7S1 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Tmem54Q9D7S1 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tmem54Q9D7S1 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tmem54Q9D7S1 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tmem54Q9D7S1 Gm10052-201ENSMUST00000168019 960 ntBASIC14.34□□□□□ -0.11
Tmem54Q9D7S1 Gm27704-201ENSMUST00000185094 107 ntBASIC14.34□□□□□ -0.11
Tmem54Q9D7S1 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.34□□□□□ -0.11
Tmem54Q9D7S1 Gm36967-201ENSMUST00000193814 266 ntBASIC14.34□□□□□ -0.11
Tmem54Q9D7S1 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.34□□□□□ -0.11
Tmem54Q9D7S1 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tmem54Q9D7S1 Gm7729-201ENSMUST00000050143 801 ntBASIC14.34□□□□□ -0.11
Tmem54Q9D7S1 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tmem54Q9D7S1 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tmem54Q9D7S1 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tmem54Q9D7S1 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms