Protein–RNA interactions for Protein: Q9D6F9

Tubb4a, Tubulin beta-4A chain, mousemouse

Predictions only

Length 444 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb4aQ9D6F9 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tubb4aQ9D6F9 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.77■□□□□ 0.44
Tubb4aQ9D6F9 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tubb4aQ9D6F9 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
Tubb4aQ9D6F9 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Tubb4aQ9D6F9 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Tubb4aQ9D6F9 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tubb4aQ9D6F9 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Tubb4aQ9D6F9 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Tubb4aQ9D6F9 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tubb4aQ9D6F9 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Tubb4aQ9D6F9 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tubb4aQ9D6F9 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Tubb4aQ9D6F9 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.76■□□□□ 0.43
Tubb4aQ9D6F9 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.76■□□□□ 0.43
Tubb4aQ9D6F9 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Tubb4aQ9D6F9 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tubb4aQ9D6F9 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tubb4aQ9D6F9 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tubb4aQ9D6F9 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Tubb4aQ9D6F9 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Tubb4aQ9D6F9 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tubb4aQ9D6F9 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tubb4aQ9D6F9 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tubb4aQ9D6F9 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
Tubb4aQ9D6F9 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tubb4aQ9D6F9 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.76■□□□□ 0.43
Tubb4aQ9D6F9 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Tubb4aQ9D6F9 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.75■□□□□ 0.43
Tubb4aQ9D6F9 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubb4aQ9D6F9 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubb4aQ9D6F9 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubb4aQ9D6F9 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubb4aQ9D6F9 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubb4aQ9D6F9 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubb4aQ9D6F9 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tubb4aQ9D6F9 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubb4aQ9D6F9 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubb4aQ9D6F9 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubb4aQ9D6F9 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.75■□□□□ 0.43
Tubb4aQ9D6F9 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.75■□□□□ 0.43
Tubb4aQ9D6F9 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubb4aQ9D6F9 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tubb4aQ9D6F9 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubb4aQ9D6F9 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.75■□□□□ 0.43
Tubb4aQ9D6F9 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Tubb4aQ9D6F9 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubb4aQ9D6F9 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubb4aQ9D6F9 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubb4aQ9D6F9 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubb4aQ9D6F9 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.75■□□□□ 0.43
Tubb4aQ9D6F9 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tubb4aQ9D6F9 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.75■□□□□ 0.43
Tubb4aQ9D6F9 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Tubb4aQ9D6F9 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tubb4aQ9D6F9 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.75■□□□□ 0.43
Tubb4aQ9D6F9 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tubb4aQ9D6F9 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tubb4aQ9D6F9 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tubb4aQ9D6F9 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tubb4aQ9D6F9 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
Tubb4aQ9D6F9 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tubb4aQ9D6F9 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tubb4aQ9D6F9 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tubb4aQ9D6F9 Gm24841-201ENSMUST00000158676 357 ntBASIC17.74■□□□□ 0.43
Tubb4aQ9D6F9 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Tubb4aQ9D6F9 Gm37025-201ENSMUST00000195159 829 ntBASIC17.74■□□□□ 0.43
Tubb4aQ9D6F9 Gm18671-201ENSMUST00000214826 683 ntBASIC17.74■□□□□ 0.43
Tubb4aQ9D6F9 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tubb4aQ9D6F9 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tubb4aQ9D6F9 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tubb4aQ9D6F9 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Tubb4aQ9D6F9 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.74■□□□□ 0.43
Tubb4aQ9D6F9 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Tubb4aQ9D6F9 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tubb4aQ9D6F9 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tubb4aQ9D6F9 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tubb4aQ9D6F9 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Tubb4aQ9D6F9 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tubb4aQ9D6F9 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tubb4aQ9D6F9 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
Tubb4aQ9D6F9 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tubb4aQ9D6F9 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tubb4aQ9D6F9 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tubb4aQ9D6F9 Gm27000-201ENSMUST00000182943 842 ntBASIC17.73■□□□□ 0.43
Tubb4aQ9D6F9 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.73■□□□□ 0.43
Tubb4aQ9D6F9 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.73■□□□□ 0.43
Tubb4aQ9D6F9 Gm42569-201ENSMUST00000200539 472 ntBASIC17.73■□□□□ 0.43
Tubb4aQ9D6F9 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tubb4aQ9D6F9 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tubb4aQ9D6F9 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.73■□□□□ 0.43
Tubb4aQ9D6F9 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tubb4aQ9D6F9 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Tubb4aQ9D6F9 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Tubb4aQ9D6F9 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tubb4aQ9D6F9 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tubb4aQ9D6F9 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tubb4aQ9D6F9 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tubb4aQ9D6F9 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tubb4aQ9D6F9 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms