Protein–RNA interactions for Protein: Q9D4F8

Tubgcp4, Gamma-tubulin complex component 4, mousemouse

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp4Q9D4F8 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Tubgcp4Q9D4F8 Gm24589-201ENSMUST00000116692 94 ntBASIC17.48■□□□□ 0.39
Tubgcp4Q9D4F8 Gm34391-201ENSMUST00000203706 907 ntBASIC17.48■□□□□ 0.39
Tubgcp4Q9D4F8 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tubgcp4Q9D4F8 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tubgcp4Q9D4F8 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Tubgcp4Q9D4F8 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Tubgcp4Q9D4F8 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Tubgcp4Q9D4F8 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tubgcp4Q9D4F8 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tubgcp4Q9D4F8 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tubgcp4Q9D4F8 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Tubgcp4Q9D4F8 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.47■□□□□ 0.39
Tubgcp4Q9D4F8 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.47■□□□□ 0.39
Tubgcp4Q9D4F8 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tubgcp4Q9D4F8 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tubgcp4Q9D4F8 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Tubgcp4Q9D4F8 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Tubgcp4Q9D4F8 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.47■□□□□ 0.39
Tubgcp4Q9D4F8 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.47■□□□□ 0.39
Tubgcp4Q9D4F8 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tubgcp4Q9D4F8 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tubgcp4Q9D4F8 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tubgcp4Q9D4F8 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.47■□□□□ 0.39
Tubgcp4Q9D4F8 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tubgcp4Q9D4F8 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tubgcp4Q9D4F8 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tubgcp4Q9D4F8 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tubgcp4Q9D4F8 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tubgcp4Q9D4F8 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tubgcp4Q9D4F8 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tubgcp4Q9D4F8 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Tubgcp4Q9D4F8 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.46■□□□□ 0.39
Tubgcp4Q9D4F8 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Tubgcp4Q9D4F8 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tubgcp4Q9D4F8 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tubgcp4Q9D4F8 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tubgcp4Q9D4F8 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tubgcp4Q9D4F8 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tubgcp4Q9D4F8 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Tubgcp4Q9D4F8 Gm7153-201ENSMUST00000117092 455 ntBASIC17.46■□□□□ 0.39
Tubgcp4Q9D4F8 Gm13312-201ENSMUST00000119631 718 ntBASIC17.46■□□□□ 0.39
Tubgcp4Q9D4F8 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tubgcp4Q9D4F8 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Tubgcp4Q9D4F8 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Tubgcp4Q9D4F8 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Tubgcp4Q9D4F8 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Tubgcp4Q9D4F8 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tubgcp4Q9D4F8 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tubgcp4Q9D4F8 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.39
Tubgcp4Q9D4F8 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tubgcp4Q9D4F8 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Tubgcp4Q9D4F8 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tubgcp4Q9D4F8 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Tubgcp4Q9D4F8 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tubgcp4Q9D4F8 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tubgcp4Q9D4F8 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Tubgcp4Q9D4F8 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Tubgcp4Q9D4F8 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.46■□□□□ 0.38
Tubgcp4Q9D4F8 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Tubgcp4Q9D4F8 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tubgcp4Q9D4F8 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tubgcp4Q9D4F8 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.45■□□□□ 0.38
Tubgcp4Q9D4F8 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tubgcp4Q9D4F8 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tubgcp4Q9D4F8 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tubgcp4Q9D4F8 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tubgcp4Q9D4F8 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tubgcp4Q9D4F8 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Tubgcp4Q9D4F8 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tubgcp4Q9D4F8 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tubgcp4Q9D4F8 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tubgcp4Q9D4F8 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Tubgcp4Q9D4F8 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tubgcp4Q9D4F8 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tubgcp4Q9D4F8 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tubgcp4Q9D4F8 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Tubgcp4Q9D4F8 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tubgcp4Q9D4F8 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.45■□□□□ 0.38
Tubgcp4Q9D4F8 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tubgcp4Q9D4F8 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tubgcp4Q9D4F8 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.45■□□□□ 0.38
Tubgcp4Q9D4F8 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tubgcp4Q9D4F8 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tubgcp4Q9D4F8 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tubgcp4Q9D4F8 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Tubgcp4Q9D4F8 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.44■□□□□ 0.38
Tubgcp4Q9D4F8 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tubgcp4Q9D4F8 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tubgcp4Q9D4F8 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tubgcp4Q9D4F8 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Tubgcp4Q9D4F8 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tubgcp4Q9D4F8 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tubgcp4Q9D4F8 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.44■□□□□ 0.38
Tubgcp4Q9D4F8 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tubgcp4Q9D4F8 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tubgcp4Q9D4F8 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tubgcp4Q9D4F8 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Tubgcp4Q9D4F8 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
Tubgcp4Q9D4F8 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms