Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Mrpl55Q9CZ83 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Mrpl55Q9CZ83 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC10.85□□□□□ -0.67
Mrpl55Q9CZ83 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Mrpl55Q9CZ83 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Mrpl55Q9CZ83 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Mrpl55Q9CZ83 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Mrpl55Q9CZ83 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Mrpl55Q9CZ83 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Mrpl55Q9CZ83 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Mrpl55Q9CZ83 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Mrpl55Q9CZ83 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Mrpl55Q9CZ83 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Mrpl55Q9CZ83 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC10.85□□□□□ -0.67
Mrpl55Q9CZ83 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Mrpl55Q9CZ83 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Mrpl55Q9CZ83 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Mrpl55Q9CZ83 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Mrpl55Q9CZ83 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Mrpl55Q9CZ83 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Mrpl55Q9CZ83 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Mrpl55Q9CZ83 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC10.85□□□□□ -0.67
Mrpl55Q9CZ83 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC10.85□□□□□ -0.67
Mrpl55Q9CZ83 Gm42545-201ENSMUST00000202755 922 ntBASIC10.85□□□□□ -0.67
Mrpl55Q9CZ83 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC10.85□□□□□ -0.67
Mrpl55Q9CZ83 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC10.85□□□□□ -0.67
Mrpl55Q9CZ83 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Mrpl55Q9CZ83 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC10.85□□□□□ -0.67
Mrpl55Q9CZ83 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC10.85□□□□□ -0.67
Mrpl55Q9CZ83 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Mrpl55Q9CZ83 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Mrpl55Q9CZ83 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Mrpl55Q9CZ83 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Mrpl55Q9CZ83 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Mrpl55Q9CZ83 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Mrpl55Q9CZ83 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Mrpl55Q9CZ83 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Mrpl55Q9CZ83 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Mrpl55Q9CZ83 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Mrpl55Q9CZ83 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Mrpl55Q9CZ83 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Mrpl55Q9CZ83 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC10.85□□□□□ -0.67
Mrpl55Q9CZ83 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Mrpl55Q9CZ83 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Mrpl55Q9CZ83 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC10.85□□□□□ -0.67
Mrpl55Q9CZ83 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Mrpl55Q9CZ83 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Mrpl55Q9CZ83 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC10.85□□□□□ -0.67
Mrpl55Q9CZ83 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Mrpl55Q9CZ83 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Mrpl55Q9CZ83 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Mrpl55Q9CZ83 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC10.84□□□□□ -0.67
Mrpl55Q9CZ83 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Mrpl55Q9CZ83 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Mrpl55Q9CZ83 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Mrpl55Q9CZ83 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC10.84□□□□□ -0.67
Mrpl55Q9CZ83 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Mrpl55Q9CZ83 Gm15853-202ENSMUST00000195518 2041 ntBASIC10.84□□□□□ -0.67
Mrpl55Q9CZ83 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Mrpl55Q9CZ83 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Mrpl55Q9CZ83 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Mrpl55Q9CZ83 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Mrpl55Q9CZ83 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Mrpl55Q9CZ83 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Mrpl55Q9CZ83 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC10.84□□□□□ -0.67
Mrpl55Q9CZ83 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Mrpl55Q9CZ83 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Mrpl55Q9CZ83 Gm13836-201ENSMUST00000121159 501 ntBASIC10.84□□□□□ -0.67
Mrpl55Q9CZ83 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
Mrpl55Q9CZ83 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Mrpl55Q9CZ83 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC10.84□□□□□ -0.67
Mrpl55Q9CZ83 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Mrpl55Q9CZ83 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC10.84□□□□□ -0.67
Mrpl55Q9CZ83 AC158538.1-201ENSMUST00000225870 294 ntBASIC10.84□□□□□ -0.67
Mrpl55Q9CZ83 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Mrpl55Q9CZ83 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC10.84□□□□□ -0.67
Mrpl55Q9CZ83 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Mrpl55Q9CZ83 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Mrpl55Q9CZ83 Dmtn-210ENSMUST00000228824 2377 ntBASIC10.84□□□□□ -0.67
Mrpl55Q9CZ83 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Mrpl55Q9CZ83 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Mrpl55Q9CZ83 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Mrpl55Q9CZ83 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Mrpl55Q9CZ83 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Mrpl55Q9CZ83 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Mrpl55Q9CZ83 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Mrpl55Q9CZ83 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Mrpl55Q9CZ83 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Mrpl55Q9CZ83 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Mrpl55Q9CZ83 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC10.84□□□□□ -0.67
Mrpl55Q9CZ83 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC10.83□□□□□ -0.68
Mrpl55Q9CZ83 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Mrpl55Q9CZ83 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Mrpl55Q9CZ83 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Mrpl55Q9CZ83 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Mrpl55Q9CZ83 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Mrpl55Q9CZ83 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Mrpl55Q9CZ83 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Mrpl55Q9CZ83 Rncr4-201ENSMUST00000194541 2234 ntBASIC10.83□□□□□ -0.68
Mrpl55Q9CZ83 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms