Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC15.22■□□□□ 0.03
Trim13Q9CYB0 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim13Q9CYB0 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Trim13Q9CYB0 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim13Q9CYB0 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim13Q9CYB0 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim13Q9CYB0 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim13Q9CYB0 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim13Q9CYB0 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trim13Q9CYB0 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim13Q9CYB0 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim13Q9CYB0 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim13Q9CYB0 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.22■□□□□ 0.03
Trim13Q9CYB0 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim13Q9CYB0 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Trim13Q9CYB0 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.21■□□□□ 0.03
Trim13Q9CYB0 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.21■□□□□ 0.03
Trim13Q9CYB0 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim13Q9CYB0 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim13Q9CYB0 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim13Q9CYB0 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim13Q9CYB0 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim13Q9CYB0 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim13Q9CYB0 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim13Q9CYB0 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Trim13Q9CYB0 Gm13158-201ENSMUST00000122007 736 ntBASIC15.21■□□□□ 0.03
Trim13Q9CYB0 Gm24841-201ENSMUST00000158676 357 ntBASIC15.21■□□□□ 0.03
Trim13Q9CYB0 Gm42545-201ENSMUST00000202755 922 ntBASIC15.21■□□□□ 0.03
Trim13Q9CYB0 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim13Q9CYB0 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Trim13Q9CYB0 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim13Q9CYB0 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim13Q9CYB0 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim13Q9CYB0 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim13Q9CYB0 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim13Q9CYB0 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim13Q9CYB0 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim13Q9CYB0 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim13Q9CYB0 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim13Q9CYB0 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim13Q9CYB0 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim13Q9CYB0 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim13Q9CYB0 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trim13Q9CYB0 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trim13Q9CYB0 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim13Q9CYB0 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim13Q9CYB0 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.2■□□□□ 0.02
Trim13Q9CYB0 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trim13Q9CYB0 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim13Q9CYB0 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trim13Q9CYB0 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim13Q9CYB0 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim13Q9CYB0 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim13Q9CYB0 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.2■□□□□ 0.02
Trim13Q9CYB0 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.2■□□□□ 0.02
Trim13Q9CYB0 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim13Q9CYB0 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim13Q9CYB0 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim13Q9CYB0 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trim13Q9CYB0 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim13Q9CYB0 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim13Q9CYB0 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim13Q9CYB0 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim13Q9CYB0 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim13Q9CYB0 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim13Q9CYB0 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim13Q9CYB0 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim13Q9CYB0 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim13Q9CYB0 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.19■□□□□ 0.02
Trim13Q9CYB0 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Trim13Q9CYB0 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Trim13Q9CYB0 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim13Q9CYB0 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim13Q9CYB0 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim13Q9CYB0 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.19■□□□□ 0.02
Trim13Q9CYB0 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim13Q9CYB0 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim13Q9CYB0 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Trim13Q9CYB0 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim13Q9CYB0 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim13Q9CYB0 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC15.19■□□□□ 0.02
Trim13Q9CYB0 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC15.19■□□□□ 0.02
Trim13Q9CYB0 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim13Q9CYB0 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim13Q9CYB0 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim13Q9CYB0 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trim13Q9CYB0 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim13Q9CYB0 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim13Q9CYB0 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim13Q9CYB0 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim13Q9CYB0 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trim13Q9CYB0 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim13Q9CYB0 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim13Q9CYB0 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim13Q9CYB0 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim13Q9CYB0 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim13Q9CYB0 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim13Q9CYB0 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim13Q9CYB0 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim13Q9CYB0 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms