Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ssr1Q9CY50 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ssr1Q9CY50 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Ssr1Q9CY50 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ssr1Q9CY50 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ssr1Q9CY50 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.82■□□□□ 0.44
Ssr1Q9CY50 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ssr1Q9CY50 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ssr1Q9CY50 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ssr1Q9CY50 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ssr1Q9CY50 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ssr1Q9CY50 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ssr1Q9CY50 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ssr1Q9CY50 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ssr1Q9CY50 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ssr1Q9CY50 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ssr1Q9CY50 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.81■□□□□ 0.44
Ssr1Q9CY50 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ssr1Q9CY50 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.81■□□□□ 0.44
Ssr1Q9CY50 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ssr1Q9CY50 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
Ssr1Q9CY50 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ssr1Q9CY50 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ssr1Q9CY50 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ssr1Q9CY50 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ssr1Q9CY50 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ssr1Q9CY50 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.8■□□□□ 0.44
Ssr1Q9CY50 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.8■□□□□ 0.44
Ssr1Q9CY50 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ssr1Q9CY50 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Ssr1Q9CY50 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.8■□□□□ 0.44
Ssr1Q9CY50 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ssr1Q9CY50 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ssr1Q9CY50 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Ssr1Q9CY50 Gm27000-201ENSMUST00000182943 842 ntBASIC17.8■□□□□ 0.44
Ssr1Q9CY50 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.8■□□□□ 0.44
Ssr1Q9CY50 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.8■□□□□ 0.44
Ssr1Q9CY50 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.8■□□□□ 0.44
Ssr1Q9CY50 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.8■□□□□ 0.44
Ssr1Q9CY50 Timm23-208ENSMUST00000226683 750 ntBASIC17.8■□□□□ 0.44
Ssr1Q9CY50 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Ssr1Q9CY50 Gm10710-201ENSMUST00000047876 3971 ntBASIC17.8■□□□□ 0.44
Ssr1Q9CY50 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ssr1Q9CY50 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ssr1Q9CY50 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ssr1Q9CY50 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.79■□□□□ 0.44
Ssr1Q9CY50 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Ssr1Q9CY50 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ssr1Q9CY50 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Ssr1Q9CY50 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Ssr1Q9CY50 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.79■□□□□ 0.44
Ssr1Q9CY50 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.79■□□□□ 0.44
Ssr1Q9CY50 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ssr1Q9CY50 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.79■□□□□ 0.44
Ssr1Q9CY50 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.79■□□□□ 0.44
Ssr1Q9CY50 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ssr1Q9CY50 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ssr1Q9CY50 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Ssr1Q9CY50 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ssr1Q9CY50 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ssr1Q9CY50 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ssr1Q9CY50 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ssr1Q9CY50 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ssr1Q9CY50 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ssr1Q9CY50 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.78■□□□□ 0.44
Ssr1Q9CY50 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ssr1Q9CY50 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ssr1Q9CY50 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ssr1Q9CY50 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Ssr1Q9CY50 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ssr1Q9CY50 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ssr1Q9CY50 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ssr1Q9CY50 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ssr1Q9CY50 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ssr1Q9CY50 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ssr1Q9CY50 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.78■□□□□ 0.44
Ssr1Q9CY50 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ssr1Q9CY50 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Ssr1Q9CY50 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ssr1Q9CY50 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ssr1Q9CY50 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ssr1Q9CY50 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ssr1Q9CY50 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ssr1Q9CY50 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ssr1Q9CY50 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ssr1Q9CY50 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ssr1Q9CY50 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ssr1Q9CY50 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ssr1Q9CY50 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Ssr1Q9CY50 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ssr1Q9CY50 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ssr1Q9CY50 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ssr1Q9CY50 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ssr1Q9CY50 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ssr1Q9CY50 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ssr1Q9CY50 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Ssr1Q9CY50 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ssr1Q9CY50 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ssr1Q9CY50 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ssr1Q9CY50 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms