Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chd1lQ9CXF7 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chd1lQ9CXF7 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Chd1lQ9CXF7 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Chd1lQ9CXF7 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chd1lQ9CXF7 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chd1lQ9CXF7 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chd1lQ9CXF7 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chd1lQ9CXF7 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.61■□□□□ 0.57
Chd1lQ9CXF7 Ntrk2-205ENSMUST00000224402 2284 ntBASIC18.61■□□□□ 0.57
Chd1lQ9CXF7 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chd1lQ9CXF7 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chd1lQ9CXF7 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chd1lQ9CXF7 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chd1lQ9CXF7 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Chd1lQ9CXF7 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chd1lQ9CXF7 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chd1lQ9CXF7 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chd1lQ9CXF7 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.6■□□□□ 0.57
Chd1lQ9CXF7 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chd1lQ9CXF7 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Chd1lQ9CXF7 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Chd1lQ9CXF7 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.6■□□□□ 0.57
Chd1lQ9CXF7 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chd1lQ9CXF7 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chd1lQ9CXF7 Gm42901-201ENSMUST00000197735 3171 ntBASIC18.6■□□□□ 0.57
Chd1lQ9CXF7 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC18.6■□□□□ 0.57
Chd1lQ9CXF7 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chd1lQ9CXF7 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chd1lQ9CXF7 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chd1lQ9CXF7 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chd1lQ9CXF7 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Chd1lQ9CXF7 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Chd1lQ9CXF7 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC18.59■□□□□ 0.57
Chd1lQ9CXF7 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chd1lQ9CXF7 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chd1lQ9CXF7 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chd1lQ9CXF7 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.59■□□□□ 0.57
Chd1lQ9CXF7 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chd1lQ9CXF7 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chd1lQ9CXF7 Gm12896-201ENSMUST00000118430 226 ntBASIC18.59■□□□□ 0.57
Chd1lQ9CXF7 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Chd1lQ9CXF7 Gm42569-201ENSMUST00000200539 472 ntBASIC18.59■□□□□ 0.57
Chd1lQ9CXF7 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chd1lQ9CXF7 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chd1lQ9CXF7 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chd1lQ9CXF7 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chd1lQ9CXF7 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Chd1lQ9CXF7 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Chd1lQ9CXF7 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Chd1lQ9CXF7 Asic1-205ENSMUST00000228185 1818 ntBASIC18.58■□□□□ 0.57
Chd1lQ9CXF7 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Chd1lQ9CXF7 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC18.58■□□□□ 0.57
Chd1lQ9CXF7 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Chd1lQ9CXF7 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Chd1lQ9CXF7 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Chd1lQ9CXF7 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
Chd1lQ9CXF7 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Chd1lQ9CXF7 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
Chd1lQ9CXF7 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Chd1lQ9CXF7 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chd1lQ9CXF7 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Chd1lQ9CXF7 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.58■□□□□ 0.56
Chd1lQ9CXF7 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.58■□□□□ 0.56
Chd1lQ9CXF7 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chd1lQ9CXF7 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chd1lQ9CXF7 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.58■□□□□ 0.56
Chd1lQ9CXF7 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC18.58■□□□□ 0.56
Chd1lQ9CXF7 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Chd1lQ9CXF7 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chd1lQ9CXF7 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chd1lQ9CXF7 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Chd1lQ9CXF7 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Chd1lQ9CXF7 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Chd1lQ9CXF7 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chd1lQ9CXF7 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chd1lQ9CXF7 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chd1lQ9CXF7 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
Chd1lQ9CXF7 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chd1lQ9CXF7 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Chd1lQ9CXF7 Gm12382-201ENSMUST00000122005 922 ntBASIC18.57■□□□□ 0.56
Chd1lQ9CXF7 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chd1lQ9CXF7 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Chd1lQ9CXF7 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chd1lQ9CXF7 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chd1lQ9CXF7 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chd1lQ9CXF7 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chd1lQ9CXF7 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chd1lQ9CXF7 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chd1lQ9CXF7 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Chd1lQ9CXF7 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chd1lQ9CXF7 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chd1lQ9CXF7 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chd1lQ9CXF7 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Chd1lQ9CXF7 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chd1lQ9CXF7 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chd1lQ9CXF7 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC18.56■□□□□ 0.56
Chd1lQ9CXF7 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Chd1lQ9CXF7 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC18.56■□□□□ 0.56
Chd1lQ9CXF7 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms