Protein–RNA interactions for Protein: Q9CQE0

Rnf138, E3 ubiquitin-protein ligase RNF138, mousemouse

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf138Q9CQE0 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Rnf138Q9CQE0 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC15.25■□□□□ 0.03
Rnf138Q9CQE0 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf138Q9CQE0 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.25■□□□□ 0.03
Rnf138Q9CQE0 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf138Q9CQE0 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf138Q9CQE0 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Rnf138Q9CQE0 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf138Q9CQE0 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf138Q9CQE0 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf138Q9CQE0 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Rnf138Q9CQE0 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf138Q9CQE0 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.24■□□□□ 0.03
Rnf138Q9CQE0 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf138Q9CQE0 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf138Q9CQE0 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.24■□□□□ 0.03
Rnf138Q9CQE0 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf138Q9CQE0 Gm11452-201ENSMUST00000122376 690 ntBASIC15.24■□□□□ 0.03
Rnf138Q9CQE0 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Rnf138Q9CQE0 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.24■□□□□ 0.03
Rnf138Q9CQE0 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.24■□□□□ 0.03
Rnf138Q9CQE0 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Rnf138Q9CQE0 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
Rnf138Q9CQE0 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
Rnf138Q9CQE0 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Rnf138Q9CQE0 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.24■□□□□ 0.03
Rnf138Q9CQE0 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.24■□□□□ 0.03
Rnf138Q9CQE0 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.24■□□□□ 0.03
Rnf138Q9CQE0 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf138Q9CQE0 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf138Q9CQE0 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.24■□□□□ 0.03
Rnf138Q9CQE0 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf138Q9CQE0 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf138Q9CQE0 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf138Q9CQE0 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf138Q9CQE0 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Rnf138Q9CQE0 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf138Q9CQE0 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Rnf138Q9CQE0 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf138Q9CQE0 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Rnf138Q9CQE0 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf138Q9CQE0 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Rnf138Q9CQE0 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf138Q9CQE0 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf138Q9CQE0 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Rnf138Q9CQE0 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf138Q9CQE0 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Rnf138Q9CQE0 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf138Q9CQE0 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf138Q9CQE0 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf138Q9CQE0 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.23■□□□□ 0.03
Rnf138Q9CQE0 Gm6376-201ENSMUST00000209407 580 ntBASIC15.23■□□□□ 0.03
Rnf138Q9CQE0 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.23■□□□□ 0.03
Rnf138Q9CQE0 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf138Q9CQE0 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf138Q9CQE0 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Rnf138Q9CQE0 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf138Q9CQE0 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf138Q9CQE0 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf138Q9CQE0 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf138Q9CQE0 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf138Q9CQE0 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.23■□□□□ 0.03
Rnf138Q9CQE0 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf138Q9CQE0 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf138Q9CQE0 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf138Q9CQE0 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf138Q9CQE0 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf138Q9CQE0 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Rnf138Q9CQE0 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf138Q9CQE0 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf138Q9CQE0 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf138Q9CQE0 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.22■□□□□ 0.03
Rnf138Q9CQE0 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.22■□□□□ 0.03
Rnf138Q9CQE0 Gm4535-201ENSMUST00000182274 558 ntBASIC15.22■□□□□ 0.03
Rnf138Q9CQE0 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC15.22■□□□□ 0.03
Rnf138Q9CQE0 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf138Q9CQE0 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf138Q9CQE0 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.22■□□□□ 0.03
Rnf138Q9CQE0 Gm10355-201ENSMUST00000097146 517 ntBASIC15.22■□□□□ 0.03
Rnf138Q9CQE0 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf138Q9CQE0 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf138Q9CQE0 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf138Q9CQE0 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf138Q9CQE0 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf138Q9CQE0 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf138Q9CQE0 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf138Q9CQE0 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf138Q9CQE0 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.21■□□□□ 0.03
Rnf138Q9CQE0 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf138Q9CQE0 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.21■□□□□ 0.03
Rnf138Q9CQE0 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf138Q9CQE0 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.21■□□□□ 0.03
Rnf138Q9CQE0 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.21■□□□□ 0.03
Rnf138Q9CQE0 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf138Q9CQE0 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf138Q9CQE0 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf138Q9CQE0 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Rnf138Q9CQE0 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf138Q9CQE0 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf138Q9CQE0 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms