Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 AC154634.3-201ENSMUST00000224589 736 ntBASIC20.91■□□□□ 0.94
Rtn4Q99P72 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rtn4Q99P72 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rtn4Q99P72 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rtn4Q99P72 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rtn4Q99P72 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Rtn4Q99P72 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rtn4Q99P72 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC20.91■□□□□ 0.94
Rtn4Q99P72 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rtn4Q99P72 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Rtn4Q99P72 Haglr-201ENSMUST00000100000 2085 ntBASIC20.9■□□□□ 0.94
Rtn4Q99P72 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rtn4Q99P72 Gm15743-202ENSMUST00000182690 1901 ntBASIC20.9■□□□□ 0.94
Rtn4Q99P72 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Rtn4Q99P72 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rtn4Q99P72 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Rtn4Q99P72 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rtn4Q99P72 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rtn4Q99P72 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Rtn4Q99P72 Gm28033-201ENSMUST00000184224 96 ntBASIC20.9■□□□□ 0.94
Rtn4Q99P72 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC20.9■□□□□ 0.94
Rtn4Q99P72 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC20.9■□□□□ 0.94
Rtn4Q99P72 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rtn4Q99P72 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rtn4Q99P72 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Rtn4Q99P72 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rtn4Q99P72 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rtn4Q99P72 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rtn4Q99P72 Gm43294-201ENSMUST00000202850 2490 ntBASIC20.89■□□□□ 0.94
Rtn4Q99P72 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.94
Rtn4Q99P72 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC20.89■□□□□ 0.93
Rtn4Q99P72 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rtn4Q99P72 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Rtn4Q99P72 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC20.89■□□□□ 0.93
Rtn4Q99P72 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC20.89■□□□□ 0.93
Rtn4Q99P72 Gm45574-201ENSMUST00000210921 331 ntBASIC20.89■□□□□ 0.93
Rtn4Q99P72 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC20.89■□□□□ 0.93
Rtn4Q99P72 AC114573.1-201ENSMUST00000224120 1210 ntBASIC20.89■□□□□ 0.93
Rtn4Q99P72 AC124408.1-201ENSMUST00000228938 707 ntBASIC20.89■□□□□ 0.93
Rtn4Q99P72 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Rtn4Q99P72 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Rtn4Q99P72 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rtn4Q99P72 Dancr-204ENSMUST00000132389 2347 ntBASIC20.89■□□□□ 0.93
Rtn4Q99P72 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rtn4Q99P72 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Rtn4Q99P72 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Rtn4Q99P72 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rtn4Q99P72 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rtn4Q99P72 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rtn4Q99P72 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rtn4Q99P72 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rtn4Q99P72 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rtn4Q99P72 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Rtn4Q99P72 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rtn4Q99P72 Gm27000-201ENSMUST00000182943 842 ntBASIC20.88■□□□□ 0.93
Rtn4Q99P72 Gm17971-201ENSMUST00000190239 806 ntBASIC20.88■□□□□ 0.93
Rtn4Q99P72 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
Rtn4Q99P72 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rtn4Q99P72 AC122351.1-201ENSMUST00000220467 126 ntBASIC20.88■□□□□ 0.93
Rtn4Q99P72 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rtn4Q99P72 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC20.88■□□□□ 0.93
Rtn4Q99P72 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rtn4Q99P72 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rtn4Q99P72 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rtn4Q99P72 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rtn4Q99P72 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rtn4Q99P72 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rtn4Q99P72 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rtn4Q99P72 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rtn4Q99P72 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Rtn4Q99P72 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rtn4Q99P72 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.88■□□□□ 0.93
Rtn4Q99P72 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rtn4Q99P72 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rtn4Q99P72 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
Rtn4Q99P72 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rtn4Q99P72 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC20.87■□□□□ 0.93
Rtn4Q99P72 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rtn4Q99P72 Gm12849-201ENSMUST00000120013 739 ntBASIC20.87■□□□□ 0.93
Rtn4Q99P72 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rtn4Q99P72 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rtn4Q99P72 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Rtn4Q99P72 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rtn4Q99P72 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Rtn4Q99P72 Gm7461-201ENSMUST00000058918 827 ntBASIC20.87■□□□□ 0.93
Rtn4Q99P72 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rtn4Q99P72 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rtn4Q99P72 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Rtn4Q99P72 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rtn4Q99P72 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Rtn4Q99P72 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Rtn4Q99P72 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rtn4Q99P72 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
Rtn4Q99P72 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rtn4Q99P72 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rtn4Q99P72 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rtn4Q99P72 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rtn4Q99P72 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Rtn4Q99P72 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rtn4Q99P72 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms