Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gtf2ird2Q99NI3 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Gtf2ird2Q99NI3 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Gtf2ird2Q99NI3 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Gtf2ird2Q99NI3 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gtf2ird2Q99NI3 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Gtf2ird2Q99NI3 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gtf2ird2Q99NI3 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Gtf2ird2Q99NI3 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.86■□□□□ 0.29
Gtf2ird2Q99NI3 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.86■□□□□ 0.29
Gtf2ird2Q99NI3 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.86■□□□□ 0.29
Gtf2ird2Q99NI3 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.86■□□□□ 0.29
Gtf2ird2Q99NI3 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.86■□□□□ 0.29
Gtf2ird2Q99NI3 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gtf2ird2Q99NI3 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Gtf2ird2Q99NI3 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gtf2ird2Q99NI3 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gtf2ird2Q99NI3 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gtf2ird2Q99NI3 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.85■□□□□ 0.29
Gtf2ird2Q99NI3 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gtf2ird2Q99NI3 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gtf2ird2Q99NI3 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gtf2ird2Q99NI3 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
Gtf2ird2Q99NI3 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Gtf2ird2Q99NI3 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gtf2ird2Q99NI3 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gtf2ird2Q99NI3 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Gtf2ird2Q99NI3 Gm9103-201ENSMUST00000119371 405 ntBASIC16.85■□□□□ 0.29
Gtf2ird2Q99NI3 Gm15794-201ENSMUST00000120182 631 ntBASIC16.85■□□□□ 0.29
Gtf2ird2Q99NI3 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.85■□□□□ 0.29
Gtf2ird2Q99NI3 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.85■□□□□ 0.29
Gtf2ird2Q99NI3 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.85■□□□□ 0.29
Gtf2ird2Q99NI3 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gtf2ird2Q99NI3 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.85■□□□□ 0.29
Gtf2ird2Q99NI3 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gtf2ird2Q99NI3 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.85■□□□□ 0.29
Gtf2ird2Q99NI3 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gtf2ird2Q99NI3 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gtf2ird2Q99NI3 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gtf2ird2Q99NI3 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gtf2ird2Q99NI3 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gtf2ird2Q99NI3 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gtf2ird2Q99NI3 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.84■□□□□ 0.29
Gtf2ird2Q99NI3 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gtf2ird2Q99NI3 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gtf2ird2Q99NI3 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Gtf2ird2Q99NI3 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.84■□□□□ 0.29
Gtf2ird2Q99NI3 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gtf2ird2Q99NI3 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gtf2ird2Q99NI3 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gtf2ird2Q99NI3 Mir3081-201ENSMUST00000175305 84 ntBASIC16.84■□□□□ 0.29
Gtf2ird2Q99NI3 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gtf2ird2Q99NI3 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Gtf2ird2Q99NI3 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Gtf2ird2Q99NI3 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.84■□□□□ 0.29
Gtf2ird2Q99NI3 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gtf2ird2Q99NI3 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Gtf2ird2Q99NI3 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gtf2ird2Q99NI3 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Gtf2ird2Q99NI3 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Gtf2ird2Q99NI3 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gtf2ird2Q99NI3 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.83■□□□□ 0.29
Gtf2ird2Q99NI3 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Gtf2ird2Q99NI3 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.83■□□□□ 0.29
Gtf2ird2Q99NI3 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Gtf2ird2Q99NI3 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gtf2ird2Q99NI3 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Gtf2ird2Q99NI3 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gtf2ird2Q99NI3 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Gtf2ird2Q99NI3 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Gtf2ird2Q99NI3 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Gtf2ird2Q99NI3 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.83■□□□□ 0.28
Gtf2ird2Q99NI3 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Gtf2ird2Q99NI3 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.83■□□□□ 0.28
Gtf2ird2Q99NI3 Gm18669-201ENSMUST00000216049 778 ntBASIC16.83■□□□□ 0.28
Gtf2ird2Q99NI3 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gtf2ird2Q99NI3 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gtf2ird2Q99NI3 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gtf2ird2Q99NI3 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gtf2ird2Q99NI3 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
Gtf2ird2Q99NI3 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gtf2ird2Q99NI3 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gtf2ird2Q99NI3 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gtf2ird2Q99NI3 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gtf2ird2Q99NI3 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gtf2ird2Q99NI3 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gtf2ird2Q99NI3 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Gtf2ird2Q99NI3 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Gtf2ird2Q99NI3 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Gtf2ird2Q99NI3 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Gtf2ird2Q99NI3 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gtf2ird2Q99NI3 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Gtf2ird2Q99NI3 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gtf2ird2Q99NI3 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gtf2ird2Q99NI3 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gtf2ird2Q99NI3 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Gtf2ird2Q99NI3 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Gtf2ird2Q99NI3 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gtf2ird2Q99NI3 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Gtf2ird2Q99NI3 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms