Protein–RNA interactions for Protein: Q99N13

Hdac9, Histone deacetylase 9, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac9Q99N13 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Hdac9Q99N13 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Hdac9Q99N13 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hdac9Q99N13 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Hdac9Q99N13 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.28■□□□□ 0.68
Hdac9Q99N13 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hdac9Q99N13 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Hdac9Q99N13 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hdac9Q99N13 Gm12260-201ENSMUST00000122447 411 ntBASIC19.28■□□□□ 0.68
Hdac9Q99N13 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC19.28■□□□□ 0.68
Hdac9Q99N13 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC19.28■□□□□ 0.68
Hdac9Q99N13 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hdac9Q99N13 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hdac9Q99N13 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Hdac9Q99N13 Gm6550-201ENSMUST00000187574 993 ntBASIC19.28■□□□□ 0.68
Hdac9Q99N13 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hdac9Q99N13 Gm8655-201ENSMUST00000221159 852 ntBASIC19.28■□□□□ 0.68
Hdac9Q99N13 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC19.28■□□□□ 0.68
Hdac9Q99N13 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hdac9Q99N13 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Hdac9Q99N13 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC19.28■□□□□ 0.68
Hdac9Q99N13 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hdac9Q99N13 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hdac9Q99N13 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hdac9Q99N13 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hdac9Q99N13 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC19.28■□□□□ 0.68
Hdac9Q99N13 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Hdac9Q99N13 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hdac9Q99N13 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Hdac9Q99N13 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hdac9Q99N13 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.27■□□□□ 0.68
Hdac9Q99N13 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Hdac9Q99N13 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hdac9Q99N13 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hdac9Q99N13 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC19.27■□□□□ 0.68
Hdac9Q99N13 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC19.27■□□□□ 0.68
Hdac9Q99N13 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hdac9Q99N13 Gm6736-201ENSMUST00000166583 948 ntBASIC19.27■□□□□ 0.68
Hdac9Q99N13 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Hdac9Q99N13 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Hdac9Q99N13 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hdac9Q99N13 Gm9172-201ENSMUST00000212092 954 ntBASIC19.27■□□□□ 0.68
Hdac9Q99N13 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hdac9Q99N13 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Hdac9Q99N13 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Hdac9Q99N13 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hdac9Q99N13 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.27■□□□□ 0.68
Hdac9Q99N13 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Hdac9Q99N13 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hdac9Q99N13 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Hdac9Q99N13 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Hdac9Q99N13 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Hdac9Q99N13 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Hdac9Q99N13 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Hdac9Q99N13 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
Hdac9Q99N13 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hdac9Q99N13 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Hdac9Q99N13 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hdac9Q99N13 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hdac9Q99N13 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Hdac9Q99N13 Gm42670-201ENSMUST00000201816 1292 ntBASIC19.26■□□□□ 0.67
Hdac9Q99N13 AC154222.1-201ENSMUST00000223882 475 ntBASIC19.26■□□□□ 0.67
Hdac9Q99N13 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC19.26■□□□□ 0.67
Hdac9Q99N13 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Hdac9Q99N13 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hdac9Q99N13 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hdac9Q99N13 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hdac9Q99N13 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.26■□□□□ 0.67
Hdac9Q99N13 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hdac9Q99N13 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Hdac9Q99N13 Slc35b2-202ENSMUST00000223987 1766 ntBASIC19.26■□□□□ 0.67
Hdac9Q99N13 Gm37500-201ENSMUST00000192059 1443 ntBASIC19.25■□□□□ 0.67
Hdac9Q99N13 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Hdac9Q99N13 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hdac9Q99N13 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hdac9Q99N13 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Hdac9Q99N13 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hdac9Q99N13 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hdac9Q99N13 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hdac9Q99N13 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC19.25■□□□□ 0.67
Hdac9Q99N13 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC19.25■□□□□ 0.67
Hdac9Q99N13 Gm27702-201ENSMUST00000184512 56 ntBASIC19.25■□□□□ 0.67
Hdac9Q99N13 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC19.25■□□□□ 0.67
Hdac9Q99N13 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC19.25■□□□□ 0.67
Hdac9Q99N13 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hdac9Q99N13 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hdac9Q99N13 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hdac9Q99N13 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hdac9Q99N13 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Hdac9Q99N13 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Hdac9Q99N13 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hdac9Q99N13 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hdac9Q99N13 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Hdac9Q99N13 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hdac9Q99N13 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Hdac9Q99N13 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hdac9Q99N13 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hdac9Q99N13 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Hdac9Q99N13 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC19.24■□□□□ 0.67
Hdac9Q99N13 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms