Protein–RNA interactions for Protein: Q99MS8

Tpgs1, Tubulin polyglutamylase complex subunit 1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpgs1Q99MS8 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tpgs1Q99MS8 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tpgs1Q99MS8 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tpgs1Q99MS8 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tpgs1Q99MS8 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tpgs1Q99MS8 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tpgs1Q99MS8 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.08■□□□□ 0.32
Tpgs1Q99MS8 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tpgs1Q99MS8 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.08■□□□□ 0.32
Tpgs1Q99MS8 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tpgs1Q99MS8 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.08■□□□□ 0.32
Tpgs1Q99MS8 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tpgs1Q99MS8 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tpgs1Q99MS8 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpgs1Q99MS8 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpgs1Q99MS8 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpgs1Q99MS8 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpgs1Q99MS8 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpgs1Q99MS8 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Tpgs1Q99MS8 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tpgs1Q99MS8 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.07■□□□□ 0.32
Tpgs1Q99MS8 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tpgs1Q99MS8 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpgs1Q99MS8 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.07■□□□□ 0.32
Tpgs1Q99MS8 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpgs1Q99MS8 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.07■□□□□ 0.32
Tpgs1Q99MS8 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.07■□□□□ 0.32
Tpgs1Q99MS8 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tpgs1Q99MS8 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.07■□□□□ 0.32
Tpgs1Q99MS8 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tpgs1Q99MS8 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.07■□□□□ 0.32
Tpgs1Q99MS8 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.07■□□□□ 0.32
Tpgs1Q99MS8 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpgs1Q99MS8 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpgs1Q99MS8 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Tpgs1Q99MS8 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Tpgs1Q99MS8 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Tpgs1Q99MS8 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tpgs1Q99MS8 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.06■□□□□ 0.32
Tpgs1Q99MS8 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tpgs1Q99MS8 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tpgs1Q99MS8 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tpgs1Q99MS8 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tpgs1Q99MS8 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Tpgs1Q99MS8 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tpgs1Q99MS8 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tpgs1Q99MS8 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tpgs1Q99MS8 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tpgs1Q99MS8 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tpgs1Q99MS8 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Tpgs1Q99MS8 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Tpgs1Q99MS8 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.06■□□□□ 0.32
Tpgs1Q99MS8 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tpgs1Q99MS8 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tpgs1Q99MS8 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tpgs1Q99MS8 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tpgs1Q99MS8 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tpgs1Q99MS8 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tpgs1Q99MS8 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tpgs1Q99MS8 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tpgs1Q99MS8 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tpgs1Q99MS8 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.05■□□□□ 0.32
Tpgs1Q99MS8 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Tpgs1Q99MS8 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Tpgs1Q99MS8 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Tpgs1Q99MS8 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tpgs1Q99MS8 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.05■□□□□ 0.32
Tpgs1Q99MS8 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tpgs1Q99MS8 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tpgs1Q99MS8 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.05■□□□□ 0.32
Tpgs1Q99MS8 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.05■□□□□ 0.32
Tpgs1Q99MS8 Mir3081-201ENSMUST00000175305 84 ntBASIC17.05■□□□□ 0.32
Tpgs1Q99MS8 Gm21362-201ENSMUST00000194272 928 ntBASIC17.05■□□□□ 0.32
Tpgs1Q99MS8 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.05■□□□□ 0.32
Tpgs1Q99MS8 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.05■□□□□ 0.32
Tpgs1Q99MS8 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tpgs1Q99MS8 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tpgs1Q99MS8 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.05■□□□□ 0.32
Tpgs1Q99MS8 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Tpgs1Q99MS8 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tpgs1Q99MS8 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Tpgs1Q99MS8 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Tpgs1Q99MS8 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tpgs1Q99MS8 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tpgs1Q99MS8 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tpgs1Q99MS8 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tpgs1Q99MS8 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.05■□□□□ 0.32
Tpgs1Q99MS8 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Tpgs1Q99MS8 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tpgs1Q99MS8 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tpgs1Q99MS8 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Tpgs1Q99MS8 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tpgs1Q99MS8 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tpgs1Q99MS8 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tpgs1Q99MS8 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Tpgs1Q99MS8 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Tpgs1Q99MS8 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Tpgs1Q99MS8 Rprl3-201ENSMUST00000157400 290 ntBASIC17.04■□□□□ 0.32
Tpgs1Q99MS8 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tpgs1Q99MS8 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms