Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Cstf1Q99LC2 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cstf1Q99LC2 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cstf1Q99LC2 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Cstf1Q99LC2 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cstf1Q99LC2 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cstf1Q99LC2 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cstf1Q99LC2 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cstf1Q99LC2 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cstf1Q99LC2 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cstf1Q99LC2 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cstf1Q99LC2 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cstf1Q99LC2 Gm25990-201ENSMUST00000102440 86 ntBASIC16.37■□□□□ 0.21
Cstf1Q99LC2 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cstf1Q99LC2 Gm13418-201ENSMUST00000119097 944 ntBASIC16.37■□□□□ 0.21
Cstf1Q99LC2 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.37■□□□□ 0.21
Cstf1Q99LC2 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.37■□□□□ 0.21
Cstf1Q99LC2 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cstf1Q99LC2 Gm7230-201ENSMUST00000173026 815 ntBASIC16.37■□□□□ 0.21
Cstf1Q99LC2 Gm25745-201ENSMUST00000174945 133 ntBASIC16.37■□□□□ 0.21
Cstf1Q99LC2 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cstf1Q99LC2 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.37■□□□□ 0.21
Cstf1Q99LC2 Gm44430-201ENSMUST00000203376 995 ntBASIC16.37■□□□□ 0.21
Cstf1Q99LC2 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cstf1Q99LC2 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cstf1Q99LC2 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Cstf1Q99LC2 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cstf1Q99LC2 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Cstf1Q99LC2 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cstf1Q99LC2 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cstf1Q99LC2 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cstf1Q99LC2 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cstf1Q99LC2 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Cstf1Q99LC2 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cstf1Q99LC2 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
Cstf1Q99LC2 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cstf1Q99LC2 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cstf1Q99LC2 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Cstf1Q99LC2 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cstf1Q99LC2 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16.36■□□□□ 0.21
Cstf1Q99LC2 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Cstf1Q99LC2 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cstf1Q99LC2 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cstf1Q99LC2 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.36■□□□□ 0.21
Cstf1Q99LC2 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cstf1Q99LC2 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cstf1Q99LC2 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cstf1Q99LC2 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cstf1Q99LC2 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cstf1Q99LC2 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cstf1Q99LC2 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cstf1Q99LC2 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cstf1Q99LC2 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cstf1Q99LC2 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cstf1Q99LC2 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Cstf1Q99LC2 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cstf1Q99LC2 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cstf1Q99LC2 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Cstf1Q99LC2 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Cstf1Q99LC2 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cstf1Q99LC2 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cstf1Q99LC2 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Cstf1Q99LC2 Gm4535-201ENSMUST00000182274 558 ntBASIC16.35■□□□□ 0.21
Cstf1Q99LC2 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Cstf1Q99LC2 Gm6089-201ENSMUST00000197666 938 ntBASIC16.35■□□□□ 0.21
Cstf1Q99LC2 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cstf1Q99LC2 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cstf1Q99LC2 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cstf1Q99LC2 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cstf1Q99LC2 Gm10355-201ENSMUST00000097146 517 ntBASIC16.35■□□□□ 0.21
Cstf1Q99LC2 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cstf1Q99LC2 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cstf1Q99LC2 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.35■□□□□ 0.21
Cstf1Q99LC2 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Cstf1Q99LC2 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Cstf1Q99LC2 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cstf1Q99LC2 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
Cstf1Q99LC2 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cstf1Q99LC2 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cstf1Q99LC2 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.34■□□□□ 0.21
Cstf1Q99LC2 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.34■□□□□ 0.21
Cstf1Q99LC2 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Cstf1Q99LC2 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cstf1Q99LC2 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cstf1Q99LC2 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Cstf1Q99LC2 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.34■□□□□ 0.21
Cstf1Q99LC2 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Cstf1Q99LC2 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cstf1Q99LC2 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC16.34■□□□□ 0.21
Cstf1Q99LC2 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC16.34■□□□□ 0.21
Cstf1Q99LC2 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.34■□□□□ 0.21
Cstf1Q99LC2 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cstf1Q99LC2 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cstf1Q99LC2 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cstf1Q99LC2 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cstf1Q99LC2 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cstf1Q99LC2 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cstf1Q99LC2 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cstf1Q99LC2 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cstf1Q99LC2 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms