Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Smarcd2Q99JR8 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smarcd2Q99JR8 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smarcd2Q99JR8 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Smarcd2Q99JR8 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Smarcd2Q99JR8 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Smarcd2Q99JR8 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Smarcd2Q99JR8 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.56■□□□□ 0.24
Smarcd2Q99JR8 Gm11779-201ENSMUST00000118541 368 ntBASIC16.56■□□□□ 0.24
Smarcd2Q99JR8 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
Smarcd2Q99JR8 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.56■□□□□ 0.24
Smarcd2Q99JR8 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Smarcd2Q99JR8 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.56■□□□□ 0.24
Smarcd2Q99JR8 Gm5264-201ENSMUST00000190584 848 ntBASIC16.56■□□□□ 0.24
Smarcd2Q99JR8 Gm6089-201ENSMUST00000197666 938 ntBASIC16.56■□□□□ 0.24
Smarcd2Q99JR8 Gm9172-201ENSMUST00000212092 954 ntBASIC16.56■□□□□ 0.24
Smarcd2Q99JR8 Gm8655-201ENSMUST00000221159 852 ntBASIC16.56■□□□□ 0.24
Smarcd2Q99JR8 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.56■□□□□ 0.24
Smarcd2Q99JR8 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.56■□□□□ 0.24
Smarcd2Q99JR8 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smarcd2Q99JR8 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Smarcd2Q99JR8 Gm15590-201ENSMUST00000078419 552 ntBASIC16.56■□□□□ 0.24
Smarcd2Q99JR8 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smarcd2Q99JR8 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smarcd2Q99JR8 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Smarcd2Q99JR8 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smarcd2Q99JR8 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smarcd2Q99JR8 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.55■□□□□ 0.24
Smarcd2Q99JR8 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smarcd2Q99JR8 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smarcd2Q99JR8 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smarcd2Q99JR8 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.55■□□□□ 0.24
Smarcd2Q99JR8 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC16.55■□□□□ 0.24
Smarcd2Q99JR8 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Smarcd2Q99JR8 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.55■□□□□ 0.24
Smarcd2Q99JR8 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.55■□□□□ 0.24
Smarcd2Q99JR8 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smarcd2Q99JR8 AV026068-213ENSMUST00000223675 1171 ntBASIC16.55■□□□□ 0.24
Smarcd2Q99JR8 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smarcd2Q99JR8 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Smarcd2Q99JR8 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Smarcd2Q99JR8 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smarcd2Q99JR8 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.55■□□□□ 0.24
Smarcd2Q99JR8 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.54■□□□□ 0.24
Smarcd2Q99JR8 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smarcd2Q99JR8 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smarcd2Q99JR8 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Smarcd2Q99JR8 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smarcd2Q99JR8 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Smarcd2Q99JR8 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smarcd2Q99JR8 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smarcd2Q99JR8 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smarcd2Q99JR8 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Smarcd2Q99JR8 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Smarcd2Q99JR8 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.54■□□□□ 0.24
Smarcd2Q99JR8 Gm6550-201ENSMUST00000187574 993 ntBASIC16.54■□□□□ 0.24
Smarcd2Q99JR8 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.54■□□□□ 0.24
Smarcd2Q99JR8 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smarcd2Q99JR8 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smarcd2Q99JR8 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smarcd2Q99JR8 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smarcd2Q99JR8 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smarcd2Q99JR8 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smarcd2Q99JR8 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smarcd2Q99JR8 Rarb-207ENSMUST00000225921 2756 ntBASIC16.54■□□□□ 0.24
Smarcd2Q99JR8 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
Smarcd2Q99JR8 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smarcd2Q99JR8 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcd2Q99JR8 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcd2Q99JR8 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcd2Q99JR8 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcd2Q99JR8 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcd2Q99JR8 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcd2Q99JR8 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcd2Q99JR8 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.53■□□□□ 0.24
Smarcd2Q99JR8 Gm15467-201ENSMUST00000120582 445 ntBASIC16.53■□□□□ 0.24
Smarcd2Q99JR8 Gm11780-201ENSMUST00000136880 516 ntBASIC16.53■□□□□ 0.24
Smarcd2Q99JR8 Gm25406-201ENSMUST00000157599 105 ntBASIC16.53■□□□□ 0.24
Smarcd2Q99JR8 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcd2Q99JR8 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.53■□□□□ 0.24
Smarcd2Q99JR8 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcd2Q99JR8 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcd2Q99JR8 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcd2Q99JR8 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcd2Q99JR8 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Smarcd2Q99JR8 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcd2Q99JR8 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcd2Q99JR8 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcd2Q99JR8 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcd2Q99JR8 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcd2Q99JR8 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcd2Q99JR8 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcd2Q99JR8 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smarcd2Q99JR8 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.52■□□□□ 0.24
Smarcd2Q99JR8 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Smarcd2Q99JR8 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smarcd2Q99JR8 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Smarcd2Q99JR8 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smarcd2Q99JR8 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.52■□□□□ 0.24
Smarcd2Q99JR8 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms