Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Thumpd1Q99J36 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Thumpd1Q99J36 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Thumpd1Q99J36 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Thumpd1Q99J36 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Thumpd1Q99J36 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.67□□□□□ -0.06
Thumpd1Q99J36 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Thumpd1Q99J36 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Thumpd1Q99J36 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Thumpd1Q99J36 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Thumpd1Q99J36 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Thumpd1Q99J36 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Thumpd1Q99J36 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Thumpd1Q99J36 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.66□□□□□ -0.06
Thumpd1Q99J36 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Thumpd1Q99J36 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Thumpd1Q99J36 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Thumpd1Q99J36 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Thumpd1Q99J36 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Thumpd1Q99J36 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Thumpd1Q99J36 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Thumpd1Q99J36 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Thumpd1Q99J36 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Thumpd1Q99J36 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Thumpd1Q99J36 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Thumpd1Q99J36 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC14.66□□□□□ -0.06
Thumpd1Q99J36 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Thumpd1Q99J36 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Thumpd1Q99J36 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Thumpd1Q99J36 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC14.66□□□□□ -0.06
Thumpd1Q99J36 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC14.66□□□□□ -0.06
Thumpd1Q99J36 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Thumpd1Q99J36 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.66□□□□□ -0.06
Thumpd1Q99J36 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Thumpd1Q99J36 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Thumpd1Q99J36 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.66□□□□□ -0.06
Thumpd1Q99J36 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.66□□□□□ -0.06
Thumpd1Q99J36 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Thumpd1Q99J36 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.66□□□□□ -0.06
Thumpd1Q99J36 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Thumpd1Q99J36 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Thumpd1Q99J36 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Thumpd1Q99J36 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Thumpd1Q99J36 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Thumpd1Q99J36 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Thumpd1Q99J36 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Thumpd1Q99J36 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Thumpd1Q99J36 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Thumpd1Q99J36 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC14.65□□□□□ -0.06
Thumpd1Q99J36 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Thumpd1Q99J36 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.65□□□□□ -0.06
Thumpd1Q99J36 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Thumpd1Q99J36 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Thumpd1Q99J36 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Thumpd1Q99J36 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Thumpd1Q99J36 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.65□□□□□ -0.06
Thumpd1Q99J36 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Thumpd1Q99J36 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Thumpd1Q99J36 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Thumpd1Q99J36 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Thumpd1Q99J36 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Thumpd1Q99J36 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Thumpd1Q99J36 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Thumpd1Q99J36 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Thumpd1Q99J36 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Thumpd1Q99J36 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Thumpd1Q99J36 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Thumpd1Q99J36 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Thumpd1Q99J36 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Thumpd1Q99J36 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Thumpd1Q99J36 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Thumpd1Q99J36 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Thumpd1Q99J36 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Thumpd1Q99J36 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Thumpd1Q99J36 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC14.64□□□□□ -0.07
Thumpd1Q99J36 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Thumpd1Q99J36 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Thumpd1Q99J36 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Thumpd1Q99J36 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Thumpd1Q99J36 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Thumpd1Q99J36 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Thumpd1Q99J36 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Thumpd1Q99J36 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Thumpd1Q99J36 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.64□□□□□ -0.07
Thumpd1Q99J36 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Thumpd1Q99J36 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Thumpd1Q99J36 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Thumpd1Q99J36 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Thumpd1Q99J36 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Thumpd1Q99J36 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Thumpd1Q99J36 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Thumpd1Q99J36 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Thumpd1Q99J36 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Thumpd1Q99J36 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Thumpd1Q99J36 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Thumpd1Q99J36 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Thumpd1Q99J36 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Thumpd1Q99J36 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Thumpd1Q99J36 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.63□□□□□ -0.07
Thumpd1Q99J36 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms