Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col20a1Q923P0 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col20a1Q923P0 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col20a1Q923P0 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col20a1Q923P0 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Col20a1Q923P0 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col20a1Q923P0 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col20a1Q923P0 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col20a1Q923P0 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col20a1Q923P0 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.34■□□□□ 0.69
Col20a1Q923P0 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col20a1Q923P0 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Col20a1Q923P0 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
Col20a1Q923P0 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC19.33■□□□□ 0.69
Col20a1Q923P0 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Col20a1Q923P0 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Col20a1Q923P0 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Col20a1Q923P0 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC19.33■□□□□ 0.69
Col20a1Q923P0 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.69
Col20a1Q923P0 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Col20a1Q923P0 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC19.33■□□□□ 0.69
Col20a1Q923P0 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Col20a1Q923P0 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC19.33■□□□□ 0.69
Col20a1Q923P0 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Col20a1Q923P0 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Col20a1Q923P0 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Col20a1Q923P0 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Col20a1Q923P0 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Col20a1Q923P0 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Col20a1Q923P0 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Col20a1Q923P0 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Col20a1Q923P0 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col20a1Q923P0 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Col20a1Q923P0 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col20a1Q923P0 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col20a1Q923P0 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col20a1Q923P0 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Col20a1Q923P0 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC19.32■□□□□ 0.68
Col20a1Q923P0 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Col20a1Q923P0 Gm25745-201ENSMUST00000174945 133 ntBASIC19.32■□□□□ 0.68
Col20a1Q923P0 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Col20a1Q923P0 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC19.32■□□□□ 0.68
Col20a1Q923P0 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC19.32■□□□□ 0.68
Col20a1Q923P0 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC19.32■□□□□ 0.68
Col20a1Q923P0 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC19.32■□□□□ 0.68
Col20a1Q923P0 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col20a1Q923P0 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col20a1Q923P0 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col20a1Q923P0 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Col20a1Q923P0 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col20a1Q923P0 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Col20a1Q923P0 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col20a1Q923P0 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col20a1Q923P0 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col20a1Q923P0 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col20a1Q923P0 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col20a1Q923P0 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Col20a1Q923P0 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Col20a1Q923P0 Gm18195-201ENSMUST00000207604 706 ntBASIC19.31■□□□□ 0.68
Col20a1Q923P0 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col20a1Q923P0 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col20a1Q923P0 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Col20a1Q923P0 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col20a1Q923P0 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col20a1Q923P0 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col20a1Q923P0 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col20a1Q923P0 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Col20a1Q923P0 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col20a1Q923P0 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Col20a1Q923P0 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Col20a1Q923P0 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col20a1Q923P0 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col20a1Q923P0 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col20a1Q923P0 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC19.3■□□□□ 0.68
Col20a1Q923P0 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Col20a1Q923P0 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col20a1Q923P0 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Col20a1Q923P0 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Col20a1Q923P0 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col20a1Q923P0 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Col20a1Q923P0 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col20a1Q923P0 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Col20a1Q923P0 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Col20a1Q923P0 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.3■□□□□ 0.68
Col20a1Q923P0 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col20a1Q923P0 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col20a1Q923P0 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col20a1Q923P0 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC19.29■□□□□ 0.68
Col20a1Q923P0 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col20a1Q923P0 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col20a1Q923P0 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Col20a1Q923P0 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Col20a1Q923P0 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Col20a1Q923P0 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col20a1Q923P0 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col20a1Q923P0 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Col20a1Q923P0 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col20a1Q923P0 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.29■□□□□ 0.68
Col20a1Q923P0 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col20a1Q923P0 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms