Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha3Q91Y16 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha3Q91Y16 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.18■□□□□ 0.34
Pcdha3Q91Y16 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha3Q91Y16 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.18■□□□□ 0.34
Pcdha3Q91Y16 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Pcdha3Q91Y16 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha3Q91Y16 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Pcdha3Q91Y16 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Pcdha3Q91Y16 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Pcdha3Q91Y16 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Pcdha3Q91Y16 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha3Q91Y16 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Pcdha3Q91Y16 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha3Q91Y16 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha3Q91Y16 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha3Q91Y16 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha3Q91Y16 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha3Q91Y16 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha3Q91Y16 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha3Q91Y16 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha3Q91Y16 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha3Q91Y16 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Pcdha3Q91Y16 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha3Q91Y16 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Pcdha3Q91Y16 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha3Q91Y16 Gm37722-201ENSMUST00000193757 208 ntBASIC17.17■□□□□ 0.34
Pcdha3Q91Y16 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha3Q91Y16 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha3Q91Y16 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
Pcdha3Q91Y16 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha3Q91Y16 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha3Q91Y16 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Pcdha3Q91Y16 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.16■□□□□ 0.34
Pcdha3Q91Y16 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha3Q91Y16 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.16■□□□□ 0.34
Pcdha3Q91Y16 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha3Q91Y16 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha3Q91Y16 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Pcdha3Q91Y16 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha3Q91Y16 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha3Q91Y16 Gm6345-202ENSMUST00000180900 204 ntBASIC17.16■□□□□ 0.34
Pcdha3Q91Y16 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha3Q91Y16 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha3Q91Y16 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha3Q91Y16 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha3Q91Y16 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha3Q91Y16 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Pcdha3Q91Y16 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha3Q91Y16 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha3Q91Y16 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha3Q91Y16 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha3Q91Y16 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha3Q91Y16 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha3Q91Y16 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.15■□□□□ 0.34
Pcdha3Q91Y16 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.15■□□□□ 0.34
Pcdha3Q91Y16 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.15■□□□□ 0.34
Pcdha3Q91Y16 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha3Q91Y16 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.15■□□□□ 0.34
Pcdha3Q91Y16 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.15■□□□□ 0.34
Pcdha3Q91Y16 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha3Q91Y16 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.15■□□□□ 0.34
Pcdha3Q91Y16 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.15■□□□□ 0.34
Pcdha3Q91Y16 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.15■□□□□ 0.34
Pcdha3Q91Y16 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.15■□□□□ 0.34
Pcdha3Q91Y16 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha3Q91Y16 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha3Q91Y16 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha3Q91Y16 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha3Q91Y16 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha3Q91Y16 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha3Q91Y16 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Pcdha3Q91Y16 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha3Q91Y16 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha3Q91Y16 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha3Q91Y16 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.15■□□□□ 0.34
Pcdha3Q91Y16 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha3Q91Y16 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
Pcdha3Q91Y16 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha3Q91Y16 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha3Q91Y16 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha3Q91Y16 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha3Q91Y16 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Pcdha3Q91Y16 Gm11336-201ENSMUST00000118168 334 ntBASIC17.14■□□□□ 0.33
Pcdha3Q91Y16 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Pcdha3Q91Y16 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Pcdha3Q91Y16 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Pcdha3Q91Y16 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha3Q91Y16 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Pcdha3Q91Y16 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Pcdha3Q91Y16 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha3Q91Y16 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Pcdha3Q91Y16 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha3Q91Y16 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha3Q91Y16 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha3Q91Y16 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha3Q91Y16 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.14■□□□□ 0.33
Pcdha3Q91Y16 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha3Q91Y16 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.14■□□□□ 0.33
Pcdha3Q91Y16 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms