Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhb1Q91Y08 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb1Q91Y08 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb1Q91Y08 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb1Q91Y08 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Pcdhb1Q91Y08 Gm37722-201ENSMUST00000193757 208 ntBASIC17.08■□□□□ 0.32
Pcdhb1Q91Y08 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Pcdhb1Q91Y08 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb1Q91Y08 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Pcdhb1Q91Y08 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Pcdhb1Q91Y08 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Pcdhb1Q91Y08 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb1Q91Y08 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb1Q91Y08 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.07■□□□□ 0.32
Pcdhb1Q91Y08 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb1Q91Y08 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb1Q91Y08 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb1Q91Y08 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb1Q91Y08 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb1Q91Y08 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb1Q91Y08 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb1Q91Y08 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Pcdhb1Q91Y08 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb1Q91Y08 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.07■□□□□ 0.32
Pcdhb1Q91Y08 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb1Q91Y08 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb1Q91Y08 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb1Q91Y08 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb1Q91Y08 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb1Q91Y08 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb1Q91Y08 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb1Q91Y08 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb1Q91Y08 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb1Q91Y08 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.07■□□□□ 0.32
Pcdhb1Q91Y08 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb1Q91Y08 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.07■□□□□ 0.32
Pcdhb1Q91Y08 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.06■□□□□ 0.32
Pcdhb1Q91Y08 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb1Q91Y08 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb1Q91Y08 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.06■□□□□ 0.32
Pcdhb1Q91Y08 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb1Q91Y08 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb1Q91Y08 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb1Q91Y08 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb1Q91Y08 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb1Q91Y08 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb1Q91Y08 Gm11355-201ENSMUST00000121120 306 ntBASIC17.06■□□□□ 0.32
Pcdhb1Q91Y08 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb1Q91Y08 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.06■□□□□ 0.32
Pcdhb1Q91Y08 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb1Q91Y08 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb1Q91Y08 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb1Q91Y08 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Pcdhb1Q91Y08 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb1Q91Y08 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb1Q91Y08 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb1Q91Y08 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb1Q91Y08 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb1Q91Y08 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Pcdhb1Q91Y08 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb1Q91Y08 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.05■□□□□ 0.32
Pcdhb1Q91Y08 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb1Q91Y08 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb1Q91Y08 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.05■□□□□ 0.32
Pcdhb1Q91Y08 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.05■□□□□ 0.32
Pcdhb1Q91Y08 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.05■□□□□ 0.32
Pcdhb1Q91Y08 Gm36967-201ENSMUST00000193814 266 ntBASIC17.05■□□□□ 0.32
Pcdhb1Q91Y08 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Pcdhb1Q91Y08 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb1Q91Y08 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.05■□□□□ 0.32
Pcdhb1Q91Y08 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb1Q91Y08 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb1Q91Y08 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb1Q91Y08 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb1Q91Y08 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb1Q91Y08 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb1Q91Y08 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Pcdhb1Q91Y08 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb1Q91Y08 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb1Q91Y08 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.04■□□□□ 0.32
Pcdhb1Q91Y08 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb1Q91Y08 Gm10013-201ENSMUST00000106074 672 ntBASIC17.04■□□□□ 0.32
Pcdhb1Q91Y08 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Pcdhb1Q91Y08 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Pcdhb1Q91Y08 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Pcdhb1Q91Y08 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Pcdhb1Q91Y08 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb1Q91Y08 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb1Q91Y08 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.04■□□□□ 0.32
Pcdhb1Q91Y08 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Pcdhb1Q91Y08 Gm10231-201ENSMUST00000181584 441 ntBASIC17.04■□□□□ 0.32
Pcdhb1Q91Y08 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb1Q91Y08 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb1Q91Y08 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Pcdhb1Q91Y08 Gm10175-202ENSMUST00000208752 441 ntBASIC17.04■□□□□ 0.32
Pcdhb1Q91Y08 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.04■□□□□ 0.32
Pcdhb1Q91Y08 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb1Q91Y08 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb1Q91Y08 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb1Q91Y08 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms