Protein–RNA interactions for Protein: Q91Y04

Pcdhb15, Protocadherin beta 15, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb15Q91Y04 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Pcdhb15Q91Y04 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb15Q91Y04 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Pcdhb15Q91Y04 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb15Q91Y04 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb15Q91Y04 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC18.44■□□□□ 0.54
Pcdhb15Q91Y04 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb15Q91Y04 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Pcdhb15Q91Y04 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb15Q91Y04 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb15Q91Y04 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.44■□□□□ 0.54
Pcdhb15Q91Y04 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb15Q91Y04 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.44■□□□□ 0.54
Pcdhb15Q91Y04 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.44■□□□□ 0.54
Pcdhb15Q91Y04 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.44■□□□□ 0.54
Pcdhb15Q91Y04 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.44■□□□□ 0.54
Pcdhb15Q91Y04 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.44■□□□□ 0.54
Pcdhb15Q91Y04 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb15Q91Y04 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb15Q91Y04 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb15Q91Y04 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.44■□□□□ 0.54
Pcdhb15Q91Y04 Ntrk2-205ENSMUST00000224402 2284 ntBASIC18.44■□□□□ 0.54
Pcdhb15Q91Y04 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb15Q91Y04 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb15Q91Y04 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb15Q91Y04 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb15Q91Y04 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb15Q91Y04 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb15Q91Y04 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb15Q91Y04 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb15Q91Y04 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb15Q91Y04 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC18.43■□□□□ 0.54
Pcdhb15Q91Y04 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb15Q91Y04 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb15Q91Y04 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
Pcdhb15Q91Y04 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb15Q91Y04 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Pcdhb15Q91Y04 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb15Q91Y04 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb15Q91Y04 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb15Q91Y04 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Pcdhb15Q91Y04 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb15Q91Y04 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb15Q91Y04 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb15Q91Y04 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb15Q91Y04 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.43■□□□□ 0.54
Pcdhb15Q91Y04 Mir5122-201ENSMUST00000175004 89 ntBASIC18.43■□□□□ 0.54
Pcdhb15Q91Y04 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.43■□□□□ 0.54
Pcdhb15Q91Y04 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb15Q91Y04 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.43■□□□□ 0.54
Pcdhb15Q91Y04 Gm7370-201ENSMUST00000219471 767 ntBASIC18.43■□□□□ 0.54
Pcdhb15Q91Y04 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb15Q91Y04 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb15Q91Y04 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb15Q91Y04 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb15Q91Y04 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb15Q91Y04 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb15Q91Y04 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb15Q91Y04 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Pcdhb15Q91Y04 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb15Q91Y04 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb15Q91Y04 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Pcdhb15Q91Y04 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb15Q91Y04 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb15Q91Y04 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Pcdhb15Q91Y04 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb15Q91Y04 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb15Q91Y04 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.42■□□□□ 0.54
Pcdhb15Q91Y04 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb15Q91Y04 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Pcdhb15Q91Y04 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC18.42■□□□□ 0.54
Pcdhb15Q91Y04 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb15Q91Y04 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb15Q91Y04 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb15Q91Y04 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb15Q91Y04 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb15Q91Y04 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Pcdhb15Q91Y04 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb15Q91Y04 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb15Q91Y04 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb15Q91Y04 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb15Q91Y04 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb15Q91Y04 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb15Q91Y04 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Pcdhb15Q91Y04 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb15Q91Y04 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb15Q91Y04 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb15Q91Y04 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Pcdhb15Q91Y04 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb15Q91Y04 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb15Q91Y04 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb15Q91Y04 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb15Q91Y04 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb15Q91Y04 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb15Q91Y04 Gm44450-201ENSMUST00000199528 114 ntBASIC18.41■□□□□ 0.54
Pcdhb15Q91Y04 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb15Q91Y04 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Pcdhb15Q91Y04 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Pcdhb15Q91Y04 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb15Q91Y04 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms