Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb18Q91Y02 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb18Q91Y02 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.14■□□□□ 0.33
Pcdhb18Q91Y02 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Pcdhb18Q91Y02 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb18Q91Y02 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb18Q91Y02 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb18Q91Y02 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb18Q91Y02 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Pcdhb18Q91Y02 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Pcdhb18Q91Y02 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb18Q91Y02 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb18Q91Y02 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Pcdhb18Q91Y02 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb18Q91Y02 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb18Q91Y02 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb18Q91Y02 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.13■□□□□ 0.33
Pcdhb18Q91Y02 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Pcdhb18Q91Y02 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb18Q91Y02 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Pcdhb18Q91Y02 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb18Q91Y02 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb18Q91Y02 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Pcdhb18Q91Y02 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb18Q91Y02 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Pcdhb18Q91Y02 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb18Q91Y02 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb18Q91Y02 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb18Q91Y02 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb18Q91Y02 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb18Q91Y02 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb18Q91Y02 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb18Q91Y02 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb18Q91Y02 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb18Q91Y02 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.12■□□□□ 0.33
Pcdhb18Q91Y02 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.12■□□□□ 0.33
Pcdhb18Q91Y02 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.12■□□□□ 0.33
Pcdhb18Q91Y02 Rps4l-201ENSMUST00000071745 943 ntBASIC17.12■□□□□ 0.33
Pcdhb18Q91Y02 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb18Q91Y02 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb18Q91Y02 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Pcdhb18Q91Y02 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb18Q91Y02 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb18Q91Y02 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.12■□□□□ 0.33
Pcdhb18Q91Y02 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb18Q91Y02 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb18Q91Y02 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb18Q91Y02 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb18Q91Y02 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb18Q91Y02 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb18Q91Y02 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb18Q91Y02 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb18Q91Y02 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb18Q91Y02 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb18Q91Y02 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb18Q91Y02 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb18Q91Y02 Gm44430-201ENSMUST00000203376 995 ntBASIC17.11■□□□□ 0.33
Pcdhb18Q91Y02 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.11■□□□□ 0.33
Pcdhb18Q91Y02 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb18Q91Y02 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb18Q91Y02 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Pcdhb18Q91Y02 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb18Q91Y02 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb18Q91Y02 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.11■□□□□ 0.33
Pcdhb18Q91Y02 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb18Q91Y02 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb18Q91Y02 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb18Q91Y02 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb18Q91Y02 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.1■□□□□ 0.33
Pcdhb18Q91Y02 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.1■□□□□ 0.33
Pcdhb18Q91Y02 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb18Q91Y02 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb18Q91Y02 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Pcdhb18Q91Y02 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb18Q91Y02 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb18Q91Y02 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb18Q91Y02 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb18Q91Y02 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.1■□□□□ 0.33
Pcdhb18Q91Y02 Gm44454-201ENSMUST00000198541 138 ntBASIC17.1■□□□□ 0.33
Pcdhb18Q91Y02 AW822252-206ENSMUST00000208904 237 ntBASIC17.1■□□□□ 0.33
Pcdhb18Q91Y02 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.1■□□□□ 0.33
Pcdhb18Q91Y02 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.1■□□□□ 0.33
Pcdhb18Q91Y02 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb18Q91Y02 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Pcdhb18Q91Y02 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Pcdhb18Q91Y02 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb18Q91Y02 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.1■□□□□ 0.33
Pcdhb18Q91Y02 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb18Q91Y02 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Pcdhb18Q91Y02 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb18Q91Y02 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb18Q91Y02 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb18Q91Y02 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb18Q91Y02 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb18Q91Y02 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb18Q91Y02 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.09■□□□□ 0.33
Pcdhb18Q91Y02 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb18Q91Y02 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.09■□□□□ 0.33
Pcdhb18Q91Y02 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb18Q91Y02 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms