Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb4Q91XZ6 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Pcdhb4Q91XZ6 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Pcdhb4Q91XZ6 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Pcdhb4Q91XZ6 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Pcdhb4Q91XZ6 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb4Q91XZ6 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.31■□□□□ 0.2
Pcdhb4Q91XZ6 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb4Q91XZ6 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb4Q91XZ6 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.31■□□□□ 0.2
Pcdhb4Q91XZ6 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.31■□□□□ 0.2
Pcdhb4Q91XZ6 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.31■□□□□ 0.2
Pcdhb4Q91XZ6 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Pcdhb4Q91XZ6 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb4Q91XZ6 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb4Q91XZ6 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb4Q91XZ6 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb4Q91XZ6 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Pcdhb4Q91XZ6 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb4Q91XZ6 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb4Q91XZ6 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb4Q91XZ6 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb4Q91XZ6 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb4Q91XZ6 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb4Q91XZ6 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.31■□□□□ 0.2
Pcdhb4Q91XZ6 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb4Q91XZ6 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb4Q91XZ6 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Pcdhb4Q91XZ6 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Pcdhb4Q91XZ6 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Pcdhb4Q91XZ6 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.3■□□□□ 0.2
Pcdhb4Q91XZ6 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb4Q91XZ6 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb4Q91XZ6 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb4Q91XZ6 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb4Q91XZ6 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb4Q91XZ6 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb4Q91XZ6 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.3■□□□□ 0.2
Pcdhb4Q91XZ6 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.3■□□□□ 0.2
Pcdhb4Q91XZ6 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.3■□□□□ 0.2
Pcdhb4Q91XZ6 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb4Q91XZ6 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb4Q91XZ6 Gm5417-201ENSMUST00000079706 384 ntBASIC16.3■□□□□ 0.2
Pcdhb4Q91XZ6 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb4Q91XZ6 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb4Q91XZ6 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb4Q91XZ6 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb4Q91XZ6 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb4Q91XZ6 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb4Q91XZ6 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb4Q91XZ6 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb4Q91XZ6 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb4Q91XZ6 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb4Q91XZ6 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb4Q91XZ6 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb4Q91XZ6 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb4Q91XZ6 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb4Q91XZ6 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb4Q91XZ6 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb4Q91XZ6 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb4Q91XZ6 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb4Q91XZ6 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb4Q91XZ6 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb4Q91XZ6 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.29■□□□□ 0.2
Pcdhb4Q91XZ6 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.29■□□□□ 0.2
Pcdhb4Q91XZ6 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb4Q91XZ6 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb4Q91XZ6 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb4Q91XZ6 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb4Q91XZ6 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb4Q91XZ6 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb4Q91XZ6 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.29■□□□□ 0.2
Pcdhb4Q91XZ6 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb4Q91XZ6 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb4Q91XZ6 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb4Q91XZ6 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb4Q91XZ6 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb4Q91XZ6 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.29■□□□□ 0.2
Pcdhb4Q91XZ6 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb4Q91XZ6 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb4Q91XZ6 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb4Q91XZ6 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb4Q91XZ6 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb4Q91XZ6 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb4Q91XZ6 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb4Q91XZ6 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb4Q91XZ6 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb4Q91XZ6 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb4Q91XZ6 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb4Q91XZ6 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb4Q91XZ6 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb4Q91XZ6 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.28■□□□□ 0.2
Pcdhb4Q91XZ6 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Pcdhb4Q91XZ6 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Pcdhb4Q91XZ6 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb4Q91XZ6 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb4Q91XZ6 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.28■□□□□ 0.2
Pcdhb4Q91XZ6 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb4Q91XZ6 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb4Q91XZ6 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms