Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhga3Q91XY5 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Pcdhga3Q91XY5 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhga3Q91XY5 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga3Q91XY5 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga3Q91XY5 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.63□□□□□ -0.07
Pcdhga3Q91XY5 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga3Q91XY5 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga3Q91XY5 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga3Q91XY5 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga3Q91XY5 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga3Q91XY5 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga3Q91XY5 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.63□□□□□ -0.07
Pcdhga3Q91XY5 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.63□□□□□ -0.07
Pcdhga3Q91XY5 Gm11539-201ENSMUST00000119837 557 ntBASIC14.63□□□□□ -0.07
Pcdhga3Q91XY5 Gm13436-201ENSMUST00000120418 567 ntBASIC14.63□□□□□ -0.07
Pcdhga3Q91XY5 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.63□□□□□ -0.07
Pcdhga3Q91XY5 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga3Q91XY5 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Pcdhga3Q91XY5 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC14.63□□□□□ -0.07
Pcdhga3Q91XY5 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga3Q91XY5 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga3Q91XY5 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.63□□□□□ -0.07
Pcdhga3Q91XY5 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga3Q91XY5 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga3Q91XY5 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga3Q91XY5 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga3Q91XY5 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga3Q91XY5 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga3Q91XY5 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga3Q91XY5 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga3Q91XY5 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Pcdhga3Q91XY5 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga3Q91XY5 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.63□□□□□ -0.07
Pcdhga3Q91XY5 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga3Q91XY5 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga3Q91XY5 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga3Q91XY5 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga3Q91XY5 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga3Q91XY5 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdhga3Q91XY5 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
Pcdhga3Q91XY5 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdhga3Q91XY5 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga3Q91XY5 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
Pcdhga3Q91XY5 Gm13474-201ENSMUST00000122466 815 ntBASIC14.62□□□□□ -0.07
Pcdhga3Q91XY5 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.62□□□□□ -0.07
Pcdhga3Q91XY5 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdhga3Q91XY5 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Pcdhga3Q91XY5 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga3Q91XY5 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.62□□□□□ -0.07
Pcdhga3Q91XY5 Mir6982-201ENSMUST00000184354 68 ntBASIC14.62□□□□□ -0.07
Pcdhga3Q91XY5 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.62□□□□□ -0.07
Pcdhga3Q91XY5 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga3Q91XY5 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga3Q91XY5 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Pcdhga3Q91XY5 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga3Q91XY5 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga3Q91XY5 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga3Q91XY5 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga3Q91XY5 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga3Q91XY5 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga3Q91XY5 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga3Q91XY5 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga3Q91XY5 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Pcdhga3Q91XY5 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdhga3Q91XY5 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga3Q91XY5 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga3Q91XY5 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga3Q91XY5 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga3Q91XY5 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.61□□□□□ -0.07
Pcdhga3Q91XY5 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga3Q91XY5 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga3Q91XY5 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Pcdhga3Q91XY5 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga3Q91XY5 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhga3Q91XY5 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhga3Q91XY5 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga3Q91XY5 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.61□□□□□ -0.07
Pcdhga3Q91XY5 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga3Q91XY5 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhga3Q91XY5 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC14.61□□□□□ -0.07
Pcdhga3Q91XY5 Gm13559-201ENSMUST00000120476 863 ntBASIC14.61□□□□□ -0.07
Pcdhga3Q91XY5 Gm16061-201ENSMUST00000122167 857 ntBASIC14.61□□□□□ -0.07
Pcdhga3Q91XY5 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC14.61□□□□□ -0.07
Pcdhga3Q91XY5 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga3Q91XY5 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhga3Q91XY5 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Pcdhga3Q91XY5 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.61□□□□□ -0.07
Pcdhga3Q91XY5 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga3Q91XY5 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Pcdhga3Q91XY5 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga3Q91XY5 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.61□□□□□ -0.07
Pcdhga3Q91XY5 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga3Q91XY5 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga3Q91XY5 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhga3Q91XY5 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Pcdhga3Q91XY5 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga3Q91XY5 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga3Q91XY5 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga3Q91XY5 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms