Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga9Q91XX9 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Pcdhga9Q91XX9 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga9Q91XX9 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga9Q91XX9 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga9Q91XX9 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.24■□□□□ 0.19
Pcdhga9Q91XX9 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Pcdhga9Q91XX9 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga9Q91XX9 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga9Q91XX9 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga9Q91XX9 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga9Q91XX9 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga9Q91XX9 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga9Q91XX9 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Pcdhga9Q91XX9 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga9Q91XX9 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga9Q91XX9 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga9Q91XX9 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga9Q91XX9 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga9Q91XX9 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga9Q91XX9 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga9Q91XX9 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga9Q91XX9 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga9Q91XX9 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhga9Q91XX9 Haglr-201ENSMUST00000100000 2085 ntBASIC16.23■□□□□ 0.19
Pcdhga9Q91XX9 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhga9Q91XX9 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhga9Q91XX9 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Pcdhga9Q91XX9 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Pcdhga9Q91XX9 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhga9Q91XX9 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhga9Q91XX9 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhga9Q91XX9 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhga9Q91XX9 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhga9Q91XX9 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Pcdhga9Q91XX9 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.23■□□□□ 0.19
Pcdhga9Q91XX9 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhga9Q91XX9 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Pcdhga9Q91XX9 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.23■□□□□ 0.19
Pcdhga9Q91XX9 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhga9Q91XX9 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhga9Q91XX9 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.23■□□□□ 0.19
Pcdhga9Q91XX9 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhga9Q91XX9 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhga9Q91XX9 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhga9Q91XX9 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhga9Q91XX9 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Pcdhga9Q91XX9 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhga9Q91XX9 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
Pcdhga9Q91XX9 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhga9Q91XX9 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.22■□□□□ 0.19
Pcdhga9Q91XX9 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhga9Q91XX9 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhga9Q91XX9 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhga9Q91XX9 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhga9Q91XX9 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhga9Q91XX9 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhga9Q91XX9 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhga9Q91XX9 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Pcdhga9Q91XX9 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhga9Q91XX9 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga9Q91XX9 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Pcdhga9Q91XX9 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga9Q91XX9 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Pcdhga9Q91XX9 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Pcdhga9Q91XX9 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Pcdhga9Q91XX9 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga9Q91XX9 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga9Q91XX9 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Pcdhga9Q91XX9 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Pcdhga9Q91XX9 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.21■□□□□ 0.19
Pcdhga9Q91XX9 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.21■□□□□ 0.19
Pcdhga9Q91XX9 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Pcdhga9Q91XX9 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.21■□□□□ 0.19
Pcdhga9Q91XX9 Gm17807-201ENSMUST00000186869 298 ntBASIC16.21■□□□□ 0.19
Pcdhga9Q91XX9 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Pcdhga9Q91XX9 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga9Q91XX9 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga9Q91XX9 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga9Q91XX9 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga9Q91XX9 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga9Q91XX9 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga9Q91XX9 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga9Q91XX9 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pcdhga9Q91XX9 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pcdhga9Q91XX9 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhga9Q91XX9 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhga9Q91XX9 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.2■□□□□ 0.18
Pcdhga9Q91XX9 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhga9Q91XX9 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhga9Q91XX9 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhga9Q91XX9 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhga9Q91XX9 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhga9Q91XX9 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.2■□□□□ 0.18
Pcdhga9Q91XX9 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.2■□□□□ 0.18
Pcdhga9Q91XX9 Gm11950-201ENSMUST00000121615 838 ntBASIC16.2■□□□□ 0.18
Pcdhga9Q91XX9 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhga9Q91XX9 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhga9Q91XX9 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.2■□□□□ 0.18
Pcdhga9Q91XX9 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms