Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lmcd1Q8VEE1 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lmcd1Q8VEE1 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lmcd1Q8VEE1 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Lmcd1Q8VEE1 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Lmcd1Q8VEE1 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Lmcd1Q8VEE1 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lmcd1Q8VEE1 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lmcd1Q8VEE1 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lmcd1Q8VEE1 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lmcd1Q8VEE1 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lmcd1Q8VEE1 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lmcd1Q8VEE1 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Lmcd1Q8VEE1 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Lmcd1Q8VEE1 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lmcd1Q8VEE1 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.43■□□□□ 0.38
Lmcd1Q8VEE1 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC17.43■□□□□ 0.38
Lmcd1Q8VEE1 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lmcd1Q8VEE1 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lmcd1Q8VEE1 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Lmcd1Q8VEE1 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lmcd1Q8VEE1 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Lmcd1Q8VEE1 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lmcd1Q8VEE1 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lmcd1Q8VEE1 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lmcd1Q8VEE1 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Lmcd1Q8VEE1 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lmcd1Q8VEE1 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC17.42■□□□□ 0.38
Lmcd1Q8VEE1 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.42■□□□□ 0.38
Lmcd1Q8VEE1 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Lmcd1Q8VEE1 Arhgef33-209ENSMUST00000225223 714 ntBASIC17.42■□□□□ 0.38
Lmcd1Q8VEE1 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lmcd1Q8VEE1 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
Lmcd1Q8VEE1 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.42■□□□□ 0.38
Lmcd1Q8VEE1 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Lmcd1Q8VEE1 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Lmcd1Q8VEE1 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lmcd1Q8VEE1 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lmcd1Q8VEE1 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Lmcd1Q8VEE1 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lmcd1Q8VEE1 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lmcd1Q8VEE1 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.42■□□□□ 0.38
Lmcd1Q8VEE1 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lmcd1Q8VEE1 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Lmcd1Q8VEE1 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.42■□□□□ 0.38
Lmcd1Q8VEE1 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lmcd1Q8VEE1 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lmcd1Q8VEE1 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lmcd1Q8VEE1 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lmcd1Q8VEE1 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Lmcd1Q8VEE1 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lmcd1Q8VEE1 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Lmcd1Q8VEE1 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Lmcd1Q8VEE1 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lmcd1Q8VEE1 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC17.41■□□□□ 0.38
Lmcd1Q8VEE1 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Lmcd1Q8VEE1 Mir1895-201ENSMUST00000122615 79 ntBASIC17.41■□□□□ 0.38
Lmcd1Q8VEE1 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Lmcd1Q8VEE1 Gm20949-201ENSMUST00000206478 952 ntBASIC17.41■□□□□ 0.38
Lmcd1Q8VEE1 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC17.41■□□□□ 0.38
Lmcd1Q8VEE1 AC159106.1-201ENSMUST00000224421 690 ntBASIC17.41■□□□□ 0.38
Lmcd1Q8VEE1 AC131709.1-201ENSMUST00000224731 1180 ntBASIC17.41■□□□□ 0.38
Lmcd1Q8VEE1 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lmcd1Q8VEE1 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lmcd1Q8VEE1 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lmcd1Q8VEE1 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.41■□□□□ 0.38
Lmcd1Q8VEE1 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Lmcd1Q8VEE1 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lmcd1Q8VEE1 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.4■□□□□ 0.38
Lmcd1Q8VEE1 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lmcd1Q8VEE1 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Lmcd1Q8VEE1 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.4■□□□□ 0.38
Lmcd1Q8VEE1 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.4■□□□□ 0.38
Lmcd1Q8VEE1 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lmcd1Q8VEE1 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lmcd1Q8VEE1 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lmcd1Q8VEE1 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.4■□□□□ 0.38
Lmcd1Q8VEE1 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lmcd1Q8VEE1 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC17.4■□□□□ 0.38
Lmcd1Q8VEE1 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC17.4■□□□□ 0.38
Lmcd1Q8VEE1 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC17.4■□□□□ 0.38
Lmcd1Q8VEE1 Gm5745-201ENSMUST00000183748 313 ntBASIC17.4■□□□□ 0.38
Lmcd1Q8VEE1 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC17.4■□□□□ 0.38
Lmcd1Q8VEE1 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lmcd1Q8VEE1 AC159295.1-201ENSMUST00000225326 940 ntBASIC17.4■□□□□ 0.38
Lmcd1Q8VEE1 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lmcd1Q8VEE1 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lmcd1Q8VEE1 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC17.4■□□□□ 0.38
Lmcd1Q8VEE1 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Lmcd1Q8VEE1 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Lmcd1Q8VEE1 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lmcd1Q8VEE1 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lmcd1Q8VEE1 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lmcd1Q8VEE1 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.4■□□□□ 0.38
Lmcd1Q8VEE1 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Lmcd1Q8VEE1 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lmcd1Q8VEE1 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lmcd1Q8VEE1 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lmcd1Q8VEE1 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lmcd1Q8VEE1 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms