Protein–RNA interactions for Protein: Q8VCQ6

Sgms1, Phosphatidylcholine:ceramide cholinephosphotransferase 1, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgms1Q8VCQ6 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sgms1Q8VCQ6 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.75■□□□□ 0.43
Sgms1Q8VCQ6 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sgms1Q8VCQ6 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sgms1Q8VCQ6 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sgms1Q8VCQ6 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sgms1Q8VCQ6 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sgms1Q8VCQ6 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sgms1Q8VCQ6 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sgms1Q8VCQ6 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sgms1Q8VCQ6 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sgms1Q8VCQ6 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.74■□□□□ 0.43
Sgms1Q8VCQ6 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.74■□□□□ 0.43
Sgms1Q8VCQ6 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sgms1Q8VCQ6 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Sgms1Q8VCQ6 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sgms1Q8VCQ6 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sgms1Q8VCQ6 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sgms1Q8VCQ6 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.74■□□□□ 0.43
Sgms1Q8VCQ6 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sgms1Q8VCQ6 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sgms1Q8VCQ6 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sgms1Q8VCQ6 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.74■□□□□ 0.43
Sgms1Q8VCQ6 Gm27389-201ENSMUST00000183622 195 ntBASIC17.74■□□□□ 0.43
Sgms1Q8VCQ6 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sgms1Q8VCQ6 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.74■□□□□ 0.43
Sgms1Q8VCQ6 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sgms1Q8VCQ6 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sgms1Q8VCQ6 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sgms1Q8VCQ6 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sgms1Q8VCQ6 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sgms1Q8VCQ6 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sgms1Q8VCQ6 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Sgms1Q8VCQ6 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.74■□□□□ 0.43
Sgms1Q8VCQ6 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sgms1Q8VCQ6 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.74■□□□□ 0.43
Sgms1Q8VCQ6 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sgms1Q8VCQ6 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sgms1Q8VCQ6 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.74■□□□□ 0.43
Sgms1Q8VCQ6 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sgms1Q8VCQ6 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sgms1Q8VCQ6 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sgms1Q8VCQ6 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sgms1Q8VCQ6 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sgms1Q8VCQ6 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sgms1Q8VCQ6 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sgms1Q8VCQ6 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
Sgms1Q8VCQ6 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sgms1Q8VCQ6 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Sgms1Q8VCQ6 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.73■□□□□ 0.43
Sgms1Q8VCQ6 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.73■□□□□ 0.43
Sgms1Q8VCQ6 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sgms1Q8VCQ6 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sgms1Q8VCQ6 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.73■□□□□ 0.43
Sgms1Q8VCQ6 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.73■□□□□ 0.43
Sgms1Q8VCQ6 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.73■□□□□ 0.43
Sgms1Q8VCQ6 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sgms1Q8VCQ6 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.73■□□□□ 0.43
Sgms1Q8VCQ6 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sgms1Q8VCQ6 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.73■□□□□ 0.43
Sgms1Q8VCQ6 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sgms1Q8VCQ6 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sgms1Q8VCQ6 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Sgms1Q8VCQ6 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sgms1Q8VCQ6 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sgms1Q8VCQ6 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.73■□□□□ 0.43
Sgms1Q8VCQ6 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.73■□□□□ 0.43
Sgms1Q8VCQ6 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sgms1Q8VCQ6 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sgms1Q8VCQ6 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sgms1Q8VCQ6 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sgms1Q8VCQ6 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sgms1Q8VCQ6 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sgms1Q8VCQ6 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
Sgms1Q8VCQ6 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sgms1Q8VCQ6 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sgms1Q8VCQ6 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sgms1Q8VCQ6 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sgms1Q8VCQ6 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sgms1Q8VCQ6 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Sgms1Q8VCQ6 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sgms1Q8VCQ6 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
Sgms1Q8VCQ6 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Sgms1Q8VCQ6 Gm37722-201ENSMUST00000193757 208 ntBASIC17.72■□□□□ 0.43
Sgms1Q8VCQ6 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Sgms1Q8VCQ6 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sgms1Q8VCQ6 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sgms1Q8VCQ6 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sgms1Q8VCQ6 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sgms1Q8VCQ6 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sgms1Q8VCQ6 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sgms1Q8VCQ6 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sgms1Q8VCQ6 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sgms1Q8VCQ6 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sgms1Q8VCQ6 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sgms1Q8VCQ6 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
Sgms1Q8VCQ6 Dancr-204ENSMUST00000132389 2347 ntBASIC17.71■□□□□ 0.43
Sgms1Q8VCQ6 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sgms1Q8VCQ6 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sgms1Q8VCQ6 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms