Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Top1mtQ8R4U6 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Top1mtQ8R4U6 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Top1mtQ8R4U6 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Top1mtQ8R4U6 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Top1mtQ8R4U6 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Top1mtQ8R4U6 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Top1mtQ8R4U6 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Top1mtQ8R4U6 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC19.65■□□□□ 0.74
Top1mtQ8R4U6 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC19.65■□□□□ 0.74
Top1mtQ8R4U6 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC19.65■□□□□ 0.74
Top1mtQ8R4U6 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Top1mtQ8R4U6 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Top1mtQ8R4U6 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Top1mtQ8R4U6 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Top1mtQ8R4U6 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC19.65■□□□□ 0.74
Top1mtQ8R4U6 Gm11355-201ENSMUST00000121120 306 ntBASIC19.65■□□□□ 0.74
Top1mtQ8R4U6 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC19.65■□□□□ 0.74
Top1mtQ8R4U6 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Top1mtQ8R4U6 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Top1mtQ8R4U6 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
Top1mtQ8R4U6 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Top1mtQ8R4U6 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Top1mtQ8R4U6 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Top1mtQ8R4U6 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Top1mtQ8R4U6 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Top1mtQ8R4U6 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Top1mtQ8R4U6 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Top1mtQ8R4U6 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Top1mtQ8R4U6 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Top1mtQ8R4U6 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Top1mtQ8R4U6 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Top1mtQ8R4U6 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Top1mtQ8R4U6 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Top1mtQ8R4U6 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Top1mtQ8R4U6 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Top1mtQ8R4U6 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Top1mtQ8R4U6 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Top1mtQ8R4U6 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Top1mtQ8R4U6 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Top1mtQ8R4U6 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Top1mtQ8R4U6 Gm10013-201ENSMUST00000106074 672 ntBASIC19.64■□□□□ 0.73
Top1mtQ8R4U6 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Top1mtQ8R4U6 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Top1mtQ8R4U6 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Top1mtQ8R4U6 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Top1mtQ8R4U6 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Top1mtQ8R4U6 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Top1mtQ8R4U6 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Top1mtQ8R4U6 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Top1mtQ8R4U6 AC115863.1-201ENSMUST00000214815 1813 ntBASIC19.64■□□□□ 0.73
Top1mtQ8R4U6 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
Top1mtQ8R4U6 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Top1mtQ8R4U6 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Top1mtQ8R4U6 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC19.63■□□□□ 0.73
Top1mtQ8R4U6 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Top1mtQ8R4U6 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Top1mtQ8R4U6 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Top1mtQ8R4U6 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Top1mtQ8R4U6 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
Top1mtQ8R4U6 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Top1mtQ8R4U6 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Top1mtQ8R4U6 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Top1mtQ8R4U6 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Top1mtQ8R4U6 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Top1mtQ8R4U6 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Top1mtQ8R4U6 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Top1mtQ8R4U6 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Top1mtQ8R4U6 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC19.63■□□□□ 0.73
Top1mtQ8R4U6 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC19.63■□□□□ 0.73
Top1mtQ8R4U6 Gm15442-201ENSMUST00000117905 1527 ntBASIC19.62■□□□□ 0.73
Top1mtQ8R4U6 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Top1mtQ8R4U6 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Top1mtQ8R4U6 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Top1mtQ8R4U6 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Top1mtQ8R4U6 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Top1mtQ8R4U6 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Top1mtQ8R4U6 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Top1mtQ8R4U6 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Top1mtQ8R4U6 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.62■□□□□ 0.73
Top1mtQ8R4U6 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Top1mtQ8R4U6 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.62■□□□□ 0.73
Top1mtQ8R4U6 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Top1mtQ8R4U6 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Top1mtQ8R4U6 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Top1mtQ8R4U6 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Top1mtQ8R4U6 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Top1mtQ8R4U6 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Top1mtQ8R4U6 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Top1mtQ8R4U6 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Top1mtQ8R4U6 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Top1mtQ8R4U6 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Top1mtQ8R4U6 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Top1mtQ8R4U6 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Top1mtQ8R4U6 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Top1mtQ8R4U6 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Top1mtQ8R4U6 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Top1mtQ8R4U6 Mir7071-201ENSMUST00000184847 69 ntBASIC19.61■□□□□ 0.73
Top1mtQ8R4U6 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Top1mtQ8R4U6 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms