Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup35Q8R4R6 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup35Q8R4R6 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nup35Q8R4R6 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC13.43□□□□□ -0.26
Nup35Q8R4R6 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC13.43□□□□□ -0.26
Nup35Q8R4R6 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC13.43□□□□□ -0.26
Nup35Q8R4R6 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup35Q8R4R6 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Nup35Q8R4R6 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC13.43□□□□□ -0.26
Nup35Q8R4R6 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup35Q8R4R6 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup35Q8R4R6 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup35Q8R4R6 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup35Q8R4R6 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup35Q8R4R6 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup35Q8R4R6 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
Nup35Q8R4R6 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup35Q8R4R6 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup35Q8R4R6 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Nup35Q8R4R6 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup35Q8R4R6 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup35Q8R4R6 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup35Q8R4R6 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup35Q8R4R6 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup35Q8R4R6 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup35Q8R4R6 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup35Q8R4R6 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nup35Q8R4R6 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup35Q8R4R6 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup35Q8R4R6 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup35Q8R4R6 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup35Q8R4R6 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nup35Q8R4R6 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.42□□□□□ -0.26
Nup35Q8R4R6 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Nup35Q8R4R6 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup35Q8R4R6 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup35Q8R4R6 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup35Q8R4R6 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup35Q8R4R6 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Nup35Q8R4R6 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup35Q8R4R6 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nup35Q8R4R6 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC13.42□□□□□ -0.26
Nup35Q8R4R6 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC13.42□□□□□ -0.26
Nup35Q8R4R6 Gm9731-201ENSMUST00000209480 747 ntBASIC13.42□□□□□ -0.26
Nup35Q8R4R6 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Nup35Q8R4R6 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup35Q8R4R6 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup35Q8R4R6 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup35Q8R4R6 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup35Q8R4R6 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup35Q8R4R6 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup35Q8R4R6 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Nup35Q8R4R6 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup35Q8R4R6 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup35Q8R4R6 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup35Q8R4R6 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup35Q8R4R6 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup35Q8R4R6 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup35Q8R4R6 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup35Q8R4R6 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup35Q8R4R6 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nup35Q8R4R6 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup35Q8R4R6 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nup35Q8R4R6 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nup35Q8R4R6 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup35Q8R4R6 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup35Q8R4R6 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup35Q8R4R6 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup35Q8R4R6 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup35Q8R4R6 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup35Q8R4R6 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Nup35Q8R4R6 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup35Q8R4R6 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup35Q8R4R6 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Nup35Q8R4R6 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC13.41□□□□□ -0.26
Nup35Q8R4R6 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup35Q8R4R6 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup35Q8R4R6 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nup35Q8R4R6 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup35Q8R4R6 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup35Q8R4R6 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nup35Q8R4R6 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nup35Q8R4R6 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nup35Q8R4R6 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC13.41□□□□□ -0.26
Nup35Q8R4R6 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup35Q8R4R6 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup35Q8R4R6 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup35Q8R4R6 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC13.41□□□□□ -0.26
Nup35Q8R4R6 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.41□□□□□ -0.26
Nup35Q8R4R6 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup35Q8R4R6 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nup35Q8R4R6 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup35Q8R4R6 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup35Q8R4R6 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup35Q8R4R6 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Nup35Q8R4R6 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup35Q8R4R6 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup35Q8R4R6 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nup35Q8R4R6 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup35Q8R4R6 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms