Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chrna3Q8R4G9 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chrna3Q8R4G9 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chrna3Q8R4G9 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.11■□□□□ 0.17
Chrna3Q8R4G9 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.11■□□□□ 0.17
Chrna3Q8R4G9 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chrna3Q8R4G9 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chrna3Q8R4G9 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chrna3Q8R4G9 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chrna3Q8R4G9 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chrna3Q8R4G9 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Chrna3Q8R4G9 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chrna3Q8R4G9 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Chrna3Q8R4G9 Olfr129-201ENSMUST00000122318 993 ntBASIC16.11■□□□□ 0.17
Chrna3Q8R4G9 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.11■□□□□ 0.17
Chrna3Q8R4G9 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Chrna3Q8R4G9 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chrna3Q8R4G9 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.11■□□□□ 0.17
Chrna3Q8R4G9 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
Chrna3Q8R4G9 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.11■□□□□ 0.17
Chrna3Q8R4G9 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Chrna3Q8R4G9 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chrna3Q8R4G9 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Chrna3Q8R4G9 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chrna3Q8R4G9 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chrna3Q8R4G9 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chrna3Q8R4G9 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Chrna3Q8R4G9 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.11■□□□□ 0.17
Chrna3Q8R4G9 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chrna3Q8R4G9 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chrna3Q8R4G9 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chrna3Q8R4G9 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Chrna3Q8R4G9 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chrna3Q8R4G9 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chrna3Q8R4G9 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Chrna3Q8R4G9 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chrna3Q8R4G9 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chrna3Q8R4G9 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chrna3Q8R4G9 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chrna3Q8R4G9 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chrna3Q8R4G9 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chrna3Q8R4G9 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chrna3Q8R4G9 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chrna3Q8R4G9 Mir3081-201ENSMUST00000175305 84 ntBASIC16.1■□□□□ 0.17
Chrna3Q8R4G9 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.1■□□□□ 0.17
Chrna3Q8R4G9 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Chrna3Q8R4G9 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chrna3Q8R4G9 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chrna3Q8R4G9 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chrna3Q8R4G9 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chrna3Q8R4G9 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chrna3Q8R4G9 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chrna3Q8R4G9 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chrna3Q8R4G9 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.1■□□□□ 0.17
Chrna3Q8R4G9 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chrna3Q8R4G9 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.09■□□□□ 0.17
Chrna3Q8R4G9 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chrna3Q8R4G9 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chrna3Q8R4G9 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chrna3Q8R4G9 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chrna3Q8R4G9 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chrna3Q8R4G9 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.09■□□□□ 0.17
Chrna3Q8R4G9 Gm27357-201ENSMUST00000183754 135 ntBASIC16.09■□□□□ 0.17
Chrna3Q8R4G9 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Chrna3Q8R4G9 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chrna3Q8R4G9 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chrna3Q8R4G9 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chrna3Q8R4G9 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chrna3Q8R4G9 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chrna3Q8R4G9 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chrna3Q8R4G9 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Chrna3Q8R4G9 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chrna3Q8R4G9 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chrna3Q8R4G9 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chrna3Q8R4G9 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.17
Chrna3Q8R4G9 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Chrna3Q8R4G9 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Chrna3Q8R4G9 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Chrna3Q8R4G9 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chrna3Q8R4G9 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Chrna3Q8R4G9 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chrna3Q8R4G9 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
Chrna3Q8R4G9 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chrna3Q8R4G9 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.08■□□□□ 0.16
Chrna3Q8R4G9 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.08■□□□□ 0.16
Chrna3Q8R4G9 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Chrna3Q8R4G9 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Chrna3Q8R4G9 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chrna3Q8R4G9 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chrna3Q8R4G9 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chrna3Q8R4G9 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chrna3Q8R4G9 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chrna3Q8R4G9 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chrna3Q8R4G9 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chrna3Q8R4G9 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chrna3Q8R4G9 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chrna3Q8R4G9 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chrna3Q8R4G9 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chrna3Q8R4G9 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chrna3Q8R4G9 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms