Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Cacnb1Q8R3Z5 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Cacnb1Q8R3Z5 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cacnb1Q8R3Z5 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cacnb1Q8R3Z5 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cacnb1Q8R3Z5 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cacnb1Q8R3Z5 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.56■□□□□ 0.56
Cacnb1Q8R3Z5 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cacnb1Q8R3Z5 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cacnb1Q8R3Z5 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.55■□□□□ 0.56
Cacnb1Q8R3Z5 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cacnb1Q8R3Z5 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.55■□□□□ 0.56
Cacnb1Q8R3Z5 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cacnb1Q8R3Z5 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cacnb1Q8R3Z5 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cacnb1Q8R3Z5 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cacnb1Q8R3Z5 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Cacnb1Q8R3Z5 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cacnb1Q8R3Z5 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cacnb1Q8R3Z5 Gm14201-201ENSMUST00000117627 289 ntBASIC18.55■□□□□ 0.56
Cacnb1Q8R3Z5 Gm14739-201ENSMUST00000120424 802 ntBASIC18.55■□□□□ 0.56
Cacnb1Q8R3Z5 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cacnb1Q8R3Z5 Gm43906-201ENSMUST00000203194 906 ntBASIC18.55■□□□□ 0.56
Cacnb1Q8R3Z5 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cacnb1Q8R3Z5 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cacnb1Q8R3Z5 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Cacnb1Q8R3Z5 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
Cacnb1Q8R3Z5 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cacnb1Q8R3Z5 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Cacnb1Q8R3Z5 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cacnb1Q8R3Z5 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cacnb1Q8R3Z5 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cacnb1Q8R3Z5 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Cacnb1Q8R3Z5 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cacnb1Q8R3Z5 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cacnb1Q8R3Z5 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cacnb1Q8R3Z5 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cacnb1Q8R3Z5 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
Cacnb1Q8R3Z5 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cacnb1Q8R3Z5 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cacnb1Q8R3Z5 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cacnb1Q8R3Z5 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Cacnb1Q8R3Z5 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Cacnb1Q8R3Z5 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cacnb1Q8R3Z5 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cacnb1Q8R3Z5 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC18.54■□□□□ 0.56
Cacnb1Q8R3Z5 Gm15225-201ENSMUST00000120449 1017 ntBASIC18.54■□□□□ 0.56
Cacnb1Q8R3Z5 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC18.54■□□□□ 0.56
Cacnb1Q8R3Z5 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cacnb1Q8R3Z5 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Cacnb1Q8R3Z5 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cacnb1Q8R3Z5 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cacnb1Q8R3Z5 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cacnb1Q8R3Z5 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Cacnb1Q8R3Z5 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cacnb1Q8R3Z5 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cacnb1Q8R3Z5 Araf-202ENSMUST00000120356 1520 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cacnb1Q8R3Z5 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cacnb1Q8R3Z5 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cacnb1Q8R3Z5 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cacnb1Q8R3Z5 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cacnb1Q8R3Z5 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cacnb1Q8R3Z5 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cacnb1Q8R3Z5 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cacnb1Q8R3Z5 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.53■□□□□ 0.56
Cacnb1Q8R3Z5 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cacnb1Q8R3Z5 Gm13474-201ENSMUST00000122466 815 ntBASIC18.53■□□□□ 0.56
Cacnb1Q8R3Z5 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cacnb1Q8R3Z5 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cacnb1Q8R3Z5 Gm26836-201ENSMUST00000181056 1568 ntTSL 5 BASIC18.53■□□□□ 0.56
Cacnb1Q8R3Z5 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cacnb1Q8R3Z5 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cacnb1Q8R3Z5 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Cacnb1Q8R3Z5 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cacnb1Q8R3Z5 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cacnb1Q8R3Z5 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Cacnb1Q8R3Z5 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cacnb1Q8R3Z5 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cacnb1Q8R3Z5 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cacnb1Q8R3Z5 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cacnb1Q8R3Z5 Timm21-201ENSMUST00000025547 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cacnb1Q8R3Z5 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Cacnb1Q8R3Z5 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Cacnb1Q8R3Z5 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cacnb1Q8R3Z5 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cacnb1Q8R3Z5 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cacnb1Q8R3Z5 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cacnb1Q8R3Z5 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cacnb1Q8R3Z5 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cacnb1Q8R3Z5 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Cacnb1Q8R3Z5 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cacnb1Q8R3Z5 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cacnb1Q8R3Z5 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cacnb1Q8R3Z5 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Cacnb1Q8R3Z5 Actl10-202ENSMUST00000226583 1501 ntBASIC18.52■□□□□ 0.56
Cacnb1Q8R3Z5 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cacnb1Q8R3Z5 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cacnb1Q8R3Z5 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.52■□□□□ 0.55
Cacnb1Q8R3Z5 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cacnb1Q8R3Z5 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms