Protein–RNA interactions for Protein: Q8R3V6

Cuedc1, CUE domain-containing protein 1, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cuedc1Q8R3V6 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cuedc1Q8R3V6 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cuedc1Q8R3V6 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cuedc1Q8R3V6 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.92□□□□□ -0.02
Cuedc1Q8R3V6 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cuedc1Q8R3V6 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cuedc1Q8R3V6 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cuedc1Q8R3V6 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cuedc1Q8R3V6 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cuedc1Q8R3V6 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cuedc1Q8R3V6 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cuedc1Q8R3V6 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cuedc1Q8R3V6 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cuedc1Q8R3V6 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cuedc1Q8R3V6 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cuedc1Q8R3V6 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cuedc1Q8R3V6 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cuedc1Q8R3V6 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cuedc1Q8R3V6 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Cuedc1Q8R3V6 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cuedc1Q8R3V6 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cuedc1Q8R3V6 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.91□□□□□ -0.02
Cuedc1Q8R3V6 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cuedc1Q8R3V6 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cuedc1Q8R3V6 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cuedc1Q8R3V6 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cuedc1Q8R3V6 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cuedc1Q8R3V6 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cuedc1Q8R3V6 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cuedc1Q8R3V6 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cuedc1Q8R3V6 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cuedc1Q8R3V6 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cuedc1Q8R3V6 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cuedc1Q8R3V6 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cuedc1Q8R3V6 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cuedc1Q8R3V6 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Cuedc1Q8R3V6 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cuedc1Q8R3V6 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.9□□□□□ -0.02
Cuedc1Q8R3V6 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cuedc1Q8R3V6 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cuedc1Q8R3V6 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Cuedc1Q8R3V6 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.9□□□□□ -0.02
Cuedc1Q8R3V6 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cuedc1Q8R3V6 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Cuedc1Q8R3V6 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.9□□□□□ -0.02
Cuedc1Q8R3V6 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.9□□□□□ -0.02
Cuedc1Q8R3V6 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cuedc1Q8R3V6 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.9□□□□□ -0.02
Cuedc1Q8R3V6 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cuedc1Q8R3V6 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cuedc1Q8R3V6 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cuedc1Q8R3V6 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cuedc1Q8R3V6 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cuedc1Q8R3V6 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cuedc1Q8R3V6 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Cuedc1Q8R3V6 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cuedc1Q8R3V6 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cuedc1Q8R3V6 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cuedc1Q8R3V6 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cuedc1Q8R3V6 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.9□□□□□ -0.02
Cuedc1Q8R3V6 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
Cuedc1Q8R3V6 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cuedc1Q8R3V6 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cuedc1Q8R3V6 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cuedc1Q8R3V6 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.89□□□□□ -0.03
Cuedc1Q8R3V6 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Cuedc1Q8R3V6 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.89□□□□□ -0.03
Cuedc1Q8R3V6 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cuedc1Q8R3V6 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Cuedc1Q8R3V6 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cuedc1Q8R3V6 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cuedc1Q8R3V6 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cuedc1Q8R3V6 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cuedc1Q8R3V6 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cuedc1Q8R3V6 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cuedc1Q8R3V6 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Cuedc1Q8R3V6 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.89□□□□□ -0.03
Cuedc1Q8R3V6 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.89□□□□□ -0.03
Cuedc1Q8R3V6 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cuedc1Q8R3V6 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Cuedc1Q8R3V6 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cuedc1Q8R3V6 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cuedc1Q8R3V6 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cuedc1Q8R3V6 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cuedc1Q8R3V6 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cuedc1Q8R3V6 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cuedc1Q8R3V6 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cuedc1Q8R3V6 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cuedc1Q8R3V6 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cuedc1Q8R3V6 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cuedc1Q8R3V6 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cuedc1Q8R3V6 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.88□□□□□ -0.03
Cuedc1Q8R3V6 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cuedc1Q8R3V6 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Cuedc1Q8R3V6 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.88□□□□□ -0.03
Cuedc1Q8R3V6 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Cuedc1Q8R3V6 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.88□□□□□ -0.03
Cuedc1Q8R3V6 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cuedc1Q8R3V6 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.88□□□□□ -0.03
Cuedc1Q8R3V6 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms