Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp7Q8R1T1 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp7Q8R1T1 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp7Q8R1T1 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp7Q8R1T1 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp7Q8R1T1 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp7Q8R1T1 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp7Q8R1T1 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp7Q8R1T1 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC20.97■□□□□ 0.95
Chmp7Q8R1T1 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp7Q8R1T1 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC20.97■□□□□ 0.95
Chmp7Q8R1T1 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC20.97■□□□□ 0.95
Chmp7Q8R1T1 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp7Q8R1T1 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp7Q8R1T1 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp7Q8R1T1 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
Chmp7Q8R1T1 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp7Q8R1T1 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp7Q8R1T1 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Chmp7Q8R1T1 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chmp7Q8R1T1 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chmp7Q8R1T1 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Chmp7Q8R1T1 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chmp7Q8R1T1 Gm12497-201ENSMUST00000138778 237 ntBASIC20.96■□□□□ 0.95
Chmp7Q8R1T1 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Chmp7Q8R1T1 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC20.96■□□□□ 0.95
Chmp7Q8R1T1 Gm7230-201ENSMUST00000173026 815 ntBASIC20.96■□□□□ 0.95
Chmp7Q8R1T1 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Chmp7Q8R1T1 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Chmp7Q8R1T1 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chmp7Q8R1T1 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chmp7Q8R1T1 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chmp7Q8R1T1 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chmp7Q8R1T1 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Chmp7Q8R1T1 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chmp7Q8R1T1 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Chmp7Q8R1T1 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
Chmp7Q8R1T1 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chmp7Q8R1T1 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chmp7Q8R1T1 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC20.95■□□□□ 0.94
Chmp7Q8R1T1 Gm15173-201ENSMUST00000122049 433 ntBASIC20.95■□□□□ 0.94
Chmp7Q8R1T1 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC20.95■□□□□ 0.94
Chmp7Q8R1T1 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC20.95■□□□□ 0.94
Chmp7Q8R1T1 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC20.95■□□□□ 0.94
Chmp7Q8R1T1 Gm37935-201ENSMUST00000192012 982 ntBASIC20.95■□□□□ 0.94
Chmp7Q8R1T1 Gm36967-201ENSMUST00000193814 266 ntBASIC20.95■□□□□ 0.94
Chmp7Q8R1T1 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chmp7Q8R1T1 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chmp7Q8R1T1 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chmp7Q8R1T1 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chmp7Q8R1T1 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chmp7Q8R1T1 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.94■□□□□ 0.94
Chmp7Q8R1T1 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp7Q8R1T1 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp7Q8R1T1 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp7Q8R1T1 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp7Q8R1T1 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp7Q8R1T1 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp7Q8R1T1 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC20.94■□□□□ 0.94
Chmp7Q8R1T1 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC20.94■□□□□ 0.94
Chmp7Q8R1T1 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp7Q8R1T1 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC20.94■□□□□ 0.94
Chmp7Q8R1T1 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp7Q8R1T1 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp7Q8R1T1 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp7Q8R1T1 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp7Q8R1T1 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Chmp7Q8R1T1 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp7Q8R1T1 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp7Q8R1T1 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Chmp7Q8R1T1 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp7Q8R1T1 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp7Q8R1T1 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp7Q8R1T1 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Chmp7Q8R1T1 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp7Q8R1T1 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp7Q8R1T1 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
Chmp7Q8R1T1 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp7Q8R1T1 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp7Q8R1T1 Gm4459-201ENSMUST00000118750 468 ntBASIC20.93■□□□□ 0.94
Chmp7Q8R1T1 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp7Q8R1T1 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC20.93■□□□□ 0.94
Chmp7Q8R1T1 Gm5364-201ENSMUST00000216789 889 ntBASIC20.93■□□□□ 0.94
Chmp7Q8R1T1 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp7Q8R1T1 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Chmp7Q8R1T1 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC20.93■□□□□ 0.94
Chmp7Q8R1T1 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp7Q8R1T1 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp7Q8R1T1 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp7Q8R1T1 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp7Q8R1T1 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp7Q8R1T1 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp7Q8R1T1 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp7Q8R1T1 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
Chmp7Q8R1T1 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp7Q8R1T1 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp7Q8R1T1 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp7Q8R1T1 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
Chmp7Q8R1T1 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp7Q8R1T1 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms