Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sf3a1Q8K4Z5 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sf3a1Q8K4Z5 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC20.09■□□□□ 0.81
Sf3a1Q8K4Z5 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sf3a1Q8K4Z5 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Sf3a1Q8K4Z5 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sf3a1Q8K4Z5 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Sf3a1Q8K4Z5 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sf3a1Q8K4Z5 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Sf3a1Q8K4Z5 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sf3a1Q8K4Z5 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sf3a1Q8K4Z5 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sf3a1Q8K4Z5 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sf3a1Q8K4Z5 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sf3a1Q8K4Z5 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sf3a1Q8K4Z5 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sf3a1Q8K4Z5 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sf3a1Q8K4Z5 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Sf3a1Q8K4Z5 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sf3a1Q8K4Z5 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sf3a1Q8K4Z5 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sf3a1Q8K4Z5 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC20.08■□□□□ 0.81
Sf3a1Q8K4Z5 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC20.08■□□□□ 0.81
Sf3a1Q8K4Z5 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sf3a1Q8K4Z5 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sf3a1Q8K4Z5 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sf3a1Q8K4Z5 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC20.08■□□□□ 0.81
Sf3a1Q8K4Z5 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Sf3a1Q8K4Z5 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Sf3a1Q8K4Z5 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
Sf3a1Q8K4Z5 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Sf3a1Q8K4Z5 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Sf3a1Q8K4Z5 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC20.07■□□□□ 0.8
Sf3a1Q8K4Z5 Gm45774-201ENSMUST00000211992 2665 ntBASIC20.07■□□□□ 0.8
Sf3a1Q8K4Z5 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Sf3a1Q8K4Z5 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Sf3a1Q8K4Z5 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sf3a1Q8K4Z5 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sf3a1Q8K4Z5 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Sf3a1Q8K4Z5 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC20.07■□□□□ 0.8
Sf3a1Q8K4Z5 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Sf3a1Q8K4Z5 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sf3a1Q8K4Z5 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Sf3a1Q8K4Z5 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC20.07■□□□□ 0.8
Sf3a1Q8K4Z5 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sf3a1Q8K4Z5 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC20.07■□□□□ 0.8
Sf3a1Q8K4Z5 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sf3a1Q8K4Z5 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC20.06■□□□□ 0.8
Sf3a1Q8K4Z5 Slc35b2-202ENSMUST00000223987 1766 ntBASIC20.06■□□□□ 0.8
Sf3a1Q8K4Z5 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sf3a1Q8K4Z5 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sf3a1Q8K4Z5 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sf3a1Q8K4Z5 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sf3a1Q8K4Z5 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sf3a1Q8K4Z5 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sf3a1Q8K4Z5 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sf3a1Q8K4Z5 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC20.06■□□□□ 0.8
Sf3a1Q8K4Z5 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sf3a1Q8K4Z5 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sf3a1Q8K4Z5 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sf3a1Q8K4Z5 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sf3a1Q8K4Z5 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sf3a1Q8K4Z5 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sf3a1Q8K4Z5 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Sf3a1Q8K4Z5 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sf3a1Q8K4Z5 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sf3a1Q8K4Z5 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sf3a1Q8K4Z5 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sf3a1Q8K4Z5 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sf3a1Q8K4Z5 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sf3a1Q8K4Z5 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
Sf3a1Q8K4Z5 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sf3a1Q8K4Z5 AC154471.1-201ENSMUST00000224418 436 ntBASIC20.05■□□□□ 0.8
Sf3a1Q8K4Z5 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sf3a1Q8K4Z5 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sf3a1Q8K4Z5 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sf3a1Q8K4Z5 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sf3a1Q8K4Z5 Gm45412-201ENSMUST00000210217 2275 ntBASIC20.05■□□□□ 0.8
Sf3a1Q8K4Z5 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Sf3a1Q8K4Z5 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sf3a1Q8K4Z5 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sf3a1Q8K4Z5 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sf3a1Q8K4Z5 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sf3a1Q8K4Z5 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Sf3a1Q8K4Z5 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sf3a1Q8K4Z5 Gm15442-201ENSMUST00000117905 1527 ntBASIC20.04■□□□□ 0.8
Sf3a1Q8K4Z5 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Sf3a1Q8K4Z5 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Sf3a1Q8K4Z5 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
Sf3a1Q8K4Z5 Gm33142-201ENSMUST00000193913 867 ntBASIC20.04■□□□□ 0.8
Sf3a1Q8K4Z5 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC20.04■□□□□ 0.8
Sf3a1Q8K4Z5 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC20.04■□□□□ 0.8
Sf3a1Q8K4Z5 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sf3a1Q8K4Z5 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Sf3a1Q8K4Z5 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sf3a1Q8K4Z5 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sf3a1Q8K4Z5 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sf3a1Q8K4Z5 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Sf3a1Q8K4Z5 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sf3a1Q8K4Z5 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms