Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ddx54Q8K4L0 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ddx54Q8K4L0 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Ddx54Q8K4L0 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ddx54Q8K4L0 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC21.43■■□□□ 1.02
Ddx54Q8K4L0 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ddx54Q8K4L0 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ddx54Q8K4L0 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ddx54Q8K4L0 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Ddx54Q8K4L0 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC21.43■■□□□ 1.02
Ddx54Q8K4L0 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ddx54Q8K4L0 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Ddx54Q8K4L0 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ddx54Q8K4L0 Mir1895-201ENSMUST00000122615 79 ntBASIC21.42■■□□□ 1.02
Ddx54Q8K4L0 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Ddx54Q8K4L0 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ddx54Q8K4L0 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Ddx54Q8K4L0 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ddx54Q8K4L0 Gm27494-201ENSMUST00000184735 189 ntBASIC21.42■■□□□ 1.02
Ddx54Q8K4L0 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Ddx54Q8K4L0 AC123834.2-201ENSMUST00000224038 2340 ntBASIC21.42■■□□□ 1.02
Ddx54Q8K4L0 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ddx54Q8K4L0 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Ddx54Q8K4L0 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ddx54Q8K4L0 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Ddx54Q8K4L0 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ddx54Q8K4L0 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Ddx54Q8K4L0 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Ddx54Q8K4L0 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Ddx54Q8K4L0 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ddx54Q8K4L0 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ddx54Q8K4L0 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Ddx54Q8K4L0 Gm4899-201ENSMUST00000178708 719 ntBASIC21.41■■□□□ 1.02
Ddx54Q8K4L0 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Ddx54Q8K4L0 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Ddx54Q8K4L0 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ddx54Q8K4L0 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Ddx54Q8K4L0 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Ddx54Q8K4L0 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ddx54Q8K4L0 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC21.4■■□□□ 1.02
Ddx54Q8K4L0 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ddx54Q8K4L0 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Ddx54Q8K4L0 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ddx54Q8K4L0 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ddx54Q8K4L0 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ddx54Q8K4L0 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ddx54Q8K4L0 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ddx54Q8K4L0 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ddx54Q8K4L0 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ddx54Q8K4L0 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC21.4■■□□□ 1.02
Ddx54Q8K4L0 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ddx54Q8K4L0 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC21.39■■□□□ 1.02
Ddx54Q8K4L0 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ddx54Q8K4L0 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Ddx54Q8K4L0 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Ddx54Q8K4L0 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ddx54Q8K4L0 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ddx54Q8K4L0 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ddx54Q8K4L0 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC21.39■■□□□ 1.01
Ddx54Q8K4L0 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC21.39■■□□□ 1.01
Ddx54Q8K4L0 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Ddx54Q8K4L0 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Ddx54Q8K4L0 Gm18622-201ENSMUST00000219361 595 ntBASIC21.39■■□□□ 1.01
Ddx54Q8K4L0 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ddx54Q8K4L0 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Ddx54Q8K4L0 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Ddx54Q8K4L0 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ddx54Q8K4L0 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ddx54Q8K4L0 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Ddx54Q8K4L0 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ddx54Q8K4L0 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ddx54Q8K4L0 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ddx54Q8K4L0 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ddx54Q8K4L0 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ddx54Q8K4L0 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ddx54Q8K4L0 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ddx54Q8K4L0 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC21.38■■□□□ 1.01
Ddx54Q8K4L0 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC21.38■■□□□ 1.01
Ddx54Q8K4L0 Gm5312-201ENSMUST00000203728 547 ntBASIC21.38■■□□□ 1.01
Ddx54Q8K4L0 AC154572.2-201ENSMUST00000225105 997 ntBASIC21.38■■□□□ 1.01
Ddx54Q8K4L0 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ddx54Q8K4L0 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Ddx54Q8K4L0 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ddx54Q8K4L0 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Ddx54Q8K4L0 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ddx54Q8K4L0 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ddx54Q8K4L0 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
Ddx54Q8K4L0 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ddx54Q8K4L0 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ddx54Q8K4L0 Tfap2a-209ENSMUST00000225180 1828 ntBASIC21.37■■□□□ 1.01
Ddx54Q8K4L0 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ddx54Q8K4L0 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC21.37■■□□□ 1.01
Ddx54Q8K4L0 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ddx54Q8K4L0 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ddx54Q8K4L0 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC21.37■■□□□ 1.01
Ddx54Q8K4L0 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ddx54Q8K4L0 Mir7023-201ENSMUST00000185093 64 ntBASIC21.37■■□□□ 1.01
Ddx54Q8K4L0 Gm17968-201ENSMUST00000194902 784 ntBASIC21.37■■□□□ 1.01
Ddx54Q8K4L0 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC21.37■■□□□ 1.01
Ddx54Q8K4L0 AC155252.2-201ENSMUST00000226946 680 ntBASIC21.37■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms