Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Cystm1Q8K353 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cystm1Q8K353 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cystm1Q8K353 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cystm1Q8K353 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cystm1Q8K353 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cystm1Q8K353 Gm29340-201ENSMUST00000188763 3854 ntBASIC10.34□□□□□ -0.75
Cystm1Q8K353 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cystm1Q8K353 Gm21596-201ENSMUST00000178049 1316 ntBASIC10.34□□□□□ -0.75
Cystm1Q8K353 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cystm1Q8K353 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
Cystm1Q8K353 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cystm1Q8K353 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cystm1Q8K353 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cystm1Q8K353 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC10.34□□□□□ -0.75
Cystm1Q8K353 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC10.34□□□□□ -0.75
Cystm1Q8K353 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cystm1Q8K353 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cystm1Q8K353 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cystm1Q8K353 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cystm1Q8K353 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC10.34□□□□□ -0.75
Cystm1Q8K353 Gm12896-201ENSMUST00000118430 226 ntBASIC10.34□□□□□ -0.75
Cystm1Q8K353 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cystm1Q8K353 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cystm1Q8K353 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cystm1Q8K353 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cystm1Q8K353 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC10.34□□□□□ -0.75
Cystm1Q8K353 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC10.34□□□□□ -0.75
Cystm1Q8K353 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cystm1Q8K353 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cystm1Q8K353 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Cystm1Q8K353 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cystm1Q8K353 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cystm1Q8K353 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cystm1Q8K353 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
Cystm1Q8K353 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC10.34□□□□□ -0.75
Cystm1Q8K353 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cystm1Q8K353 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cystm1Q8K353 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cystm1Q8K353 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cystm1Q8K353 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cystm1Q8K353 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cystm1Q8K353 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cystm1Q8K353 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Cystm1Q8K353 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cystm1Q8K353 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cystm1Q8K353 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC10.33□□□□□ -0.76
Cystm1Q8K353 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cystm1Q8K353 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Cystm1Q8K353 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Cystm1Q8K353 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Cystm1Q8K353 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC10.33□□□□□ -0.76
Cystm1Q8K353 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cystm1Q8K353 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
Cystm1Q8K353 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC10.33□□□□□ -0.76
Cystm1Q8K353 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cystm1Q8K353 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cystm1Q8K353 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Cystm1Q8K353 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cystm1Q8K353 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cystm1Q8K353 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Cystm1Q8K353 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Cystm1Q8K353 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cystm1Q8K353 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC10.33□□□□□ -0.76
Cystm1Q8K353 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC10.33□□□□□ -0.76
Cystm1Q8K353 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Cystm1Q8K353 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC10.33□□□□□ -0.76
Cystm1Q8K353 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC10.33□□□□□ -0.76
Cystm1Q8K353 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cystm1Q8K353 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cystm1Q8K353 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cystm1Q8K353 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cystm1Q8K353 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cystm1Q8K353 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cystm1Q8K353 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC10.33□□□□□ -0.76
Cystm1Q8K353 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cystm1Q8K353 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Cystm1Q8K353 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cystm1Q8K353 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cystm1Q8K353 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Cystm1Q8K353 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cystm1Q8K353 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cystm1Q8K353 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC10.33□□□□□ -0.76
Cystm1Q8K353 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cystm1Q8K353 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Cystm1Q8K353 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cystm1Q8K353 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cystm1Q8K353 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cystm1Q8K353 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cystm1Q8K353 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cystm1Q8K353 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cystm1Q8K353 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Cystm1Q8K353 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cystm1Q8K353 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cystm1Q8K353 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cystm1Q8K353 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cystm1Q8K353 Gm5643-201ENSMUST00000117081 966 ntBASIC10.32□□□□□ -0.76
Cystm1Q8K353 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC10.32□□□□□ -0.76
Cystm1Q8K353 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cystm1Q8K353 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms