Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Rfwd3Q8CIK8 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.46■□□□□ 0.07
Rfwd3Q8CIK8 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Rfwd3Q8CIK8 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Rfwd3Q8CIK8 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Rfwd3Q8CIK8 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rfwd3Q8CIK8 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rfwd3Q8CIK8 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rfwd3Q8CIK8 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rfwd3Q8CIK8 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rfwd3Q8CIK8 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.46■□□□□ 0.07
Rfwd3Q8CIK8 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.46■□□□□ 0.07
Rfwd3Q8CIK8 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Rfwd3Q8CIK8 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rfwd3Q8CIK8 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rfwd3Q8CIK8 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rfwd3Q8CIK8 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rfwd3Q8CIK8 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Rfwd3Q8CIK8 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rfwd3Q8CIK8 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rfwd3Q8CIK8 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rfwd3Q8CIK8 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rfwd3Q8CIK8 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rfwd3Q8CIK8 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rfwd3Q8CIK8 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rfwd3Q8CIK8 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rfwd3Q8CIK8 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rfwd3Q8CIK8 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rfwd3Q8CIK8 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.45■□□□□ 0.06
Rfwd3Q8CIK8 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
Rfwd3Q8CIK8 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.45■□□□□ 0.06
Rfwd3Q8CIK8 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rfwd3Q8CIK8 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rfwd3Q8CIK8 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rfwd3Q8CIK8 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rfwd3Q8CIK8 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rfwd3Q8CIK8 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.45■□□□□ 0.06
Rfwd3Q8CIK8 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rfwd3Q8CIK8 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rfwd3Q8CIK8 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rfwd3Q8CIK8 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.45■□□□□ 0.06
Rfwd3Q8CIK8 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
Rfwd3Q8CIK8 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rfwd3Q8CIK8 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Rfwd3Q8CIK8 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rfwd3Q8CIK8 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rfwd3Q8CIK8 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rfwd3Q8CIK8 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rfwd3Q8CIK8 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rfwd3Q8CIK8 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rfwd3Q8CIK8 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rfwd3Q8CIK8 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
Rfwd3Q8CIK8 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Rfwd3Q8CIK8 Gm13216-201ENSMUST00000117145 591 ntBASIC15.44■□□□□ 0.06
Rfwd3Q8CIK8 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rfwd3Q8CIK8 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rfwd3Q8CIK8 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.44■□□□□ 0.06
Rfwd3Q8CIK8 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.44■□□□□ 0.06
Rfwd3Q8CIK8 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rfwd3Q8CIK8 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rfwd3Q8CIK8 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rfwd3Q8CIK8 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.44■□□□□ 0.06
Rfwd3Q8CIK8 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rfwd3Q8CIK8 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Rfwd3Q8CIK8 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rfwd3Q8CIK8 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Rfwd3Q8CIK8 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rfwd3Q8CIK8 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rfwd3Q8CIK8 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rfwd3Q8CIK8 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.44■□□□□ 0.06
Rfwd3Q8CIK8 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rfwd3Q8CIK8 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rfwd3Q8CIK8 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.43■□□□□ 0.06
Rfwd3Q8CIK8 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rfwd3Q8CIK8 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rfwd3Q8CIK8 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rfwd3Q8CIK8 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rfwd3Q8CIK8 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rfwd3Q8CIK8 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rfwd3Q8CIK8 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rfwd3Q8CIK8 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rfwd3Q8CIK8 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rfwd3Q8CIK8 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Rfwd3Q8CIK8 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rfwd3Q8CIK8 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rfwd3Q8CIK8 Gm11336-201ENSMUST00000118168 334 ntBASIC15.43■□□□□ 0.06
Rfwd3Q8CIK8 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.43■□□□□ 0.06
Rfwd3Q8CIK8 Gm9013-201ENSMUST00000132939 882 ntBASIC15.43■□□□□ 0.06
Rfwd3Q8CIK8 Gm23634-201ENSMUST00000175071 91 ntBASIC15.43■□□□□ 0.06
Rfwd3Q8CIK8 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rfwd3Q8CIK8 Gm44450-201ENSMUST00000199528 114 ntBASIC15.43■□□□□ 0.06
Rfwd3Q8CIK8 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rfwd3Q8CIK8 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Rfwd3Q8CIK8 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rfwd3Q8CIK8 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rfwd3Q8CIK8 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rfwd3Q8CIK8 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rfwd3Q8CIK8 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rfwd3Q8CIK8 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rfwd3Q8CIK8 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms