Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.11■□□□□ 0.01
Pdlim5Q8CI51 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim5Q8CI51 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim5Q8CI51 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim5Q8CI51 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim5Q8CI51 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim5Q8CI51 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim5Q8CI51 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim5Q8CI51 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Pdlim5Q8CI51 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim5Q8CI51 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Pdlim5Q8CI51 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Pdlim5Q8CI51 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim5Q8CI51 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim5Q8CI51 Phf7-203ENSMUST00000226565 1971 ntBASIC15.11■□□□□ 0.01
Pdlim5Q8CI51 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim5Q8CI51 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim5Q8CI51 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Pdlim5Q8CI51 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pdlim5Q8CI51 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pdlim5Q8CI51 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pdlim5Q8CI51 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pdlim5Q8CI51 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pdlim5Q8CI51 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.1■□□□□ 0.01
Pdlim5Q8CI51 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pdlim5Q8CI51 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pdlim5Q8CI51 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Pdlim5Q8CI51 Gm16061-201ENSMUST00000122167 857 ntBASIC15.1■□□□□ 0.01
Pdlim5Q8CI51 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pdlim5Q8CI51 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Pdlim5Q8CI51 Gm37055-201ENSMUST00000191866 133 ntBASIC15.1■□□□□ 0.01
Pdlim5Q8CI51 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.1■□□□□ 0.01
Pdlim5Q8CI51 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.1■□□□□ 0.01
Pdlim5Q8CI51 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pdlim5Q8CI51 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pdlim5Q8CI51 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Pdlim5Q8CI51 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pdlim5Q8CI51 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pdlim5Q8CI51 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.1■□□□□ 0.01
Pdlim5Q8CI51 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pdlim5Q8CI51 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Pdlim5Q8CI51 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Pdlim5Q8CI51 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pdlim5Q8CI51 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pdlim5Q8CI51 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.1■□□□□ 0.01
Pdlim5Q8CI51 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pdlim5Q8CI51 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pdlim5Q8CI51 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pdlim5Q8CI51 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Pdlim5Q8CI51 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
Pdlim5Q8CI51 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pdlim5Q8CI51 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pdlim5Q8CI51 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pdlim5Q8CI51 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pdlim5Q8CI51 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pdlim5Q8CI51 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pdlim5Q8CI51 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pdlim5Q8CI51 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.09■□□□□ 0.01
Pdlim5Q8CI51 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pdlim5Q8CI51 AL672049.1-201ENSMUST00000197943 91 ntBASIC15.09■□□□□ 0.01
Pdlim5Q8CI51 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC15.09■□□□□ 0.01
Pdlim5Q8CI51 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pdlim5Q8CI51 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Pdlim5Q8CI51 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Pdlim5Q8CI51 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pdlim5Q8CI51 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pdlim5Q8CI51 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Pdlim5Q8CI51 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.09■□□□□ 0.01
Pdlim5Q8CI51 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pdlim5Q8CI51 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pdlim5Q8CI51 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pdlim5Q8CI51 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Pdlim5Q8CI51 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pdlim5Q8CI51 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Pdlim5Q8CI51 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pdlim5Q8CI51 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pdlim5Q8CI51 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Pdlim5Q8CI51 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pdlim5Q8CI51 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.08■□□□□ 0
Pdlim5Q8CI51 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.08■□□□□ 0
Pdlim5Q8CI51 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Pdlim5Q8CI51 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pdlim5Q8CI51 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC15.08■□□□□ 0
Pdlim5Q8CI51 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC15.08■□□□□ 0
Pdlim5Q8CI51 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pdlim5Q8CI51 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Pdlim5Q8CI51 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC15.08■□□□□ 0
Pdlim5Q8CI51 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pdlim5Q8CI51 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pdlim5Q8CI51 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Pdlim5Q8CI51 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pdlim5Q8CI51 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.08■□□□□ 0
Pdlim5Q8CI51 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
Pdlim5Q8CI51 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pdlim5Q8CI51 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Pdlim5Q8CI51 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pdlim5Q8CI51 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Pdlim5Q8CI51 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pdlim5Q8CI51 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pdlim5Q8CI51 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms